STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69674.1Hypothetical protein. (354 aa)    
Predicted Functional Partners:
AEV69673.1
Hypothetical protein.
 
     0.957
AEV69675.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
 
     0.941
AEV69676.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
 
     0.887
AEV69678.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
 
     0.779
AEV69679.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
 
     0.745
AEV69231.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme.
  
  
 0.509
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.461
AEV69657.1
Hypothetical protein.
  
     0.452
AEV67739.1
Hypothetical protein.
  
     0.447
AEV68201.1
Soluble lytic murein transglycosylase-like protein; PFAM: Transglycosylase SLT domain.
  
     0.437
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.