Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEV69677.1PFAM: Reverse transcriptase (RNA-dependent DNA polymerase). (408 aa)    
Predicted Functional Partners:
AEV68307.1
Retron-type reverse transcriptase; PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase).
  
     0.771
AEV70085.1
Retron-type reverse transcriptase; PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase).
  
     0.771
AEV70111.1
PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain.
  
     0.771
AEV70112.1
Retron-type reverse transcriptase; PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase).
  
     0.771
AEV70146.1
Retron-type reverse transcriptase; PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase).
  
     0.771
AEV70636.1
PFAM: Reverse transcriptase (RNA-dependent DNA polymerase).
  
     0.766
AEV67572.1
PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain.
  
     0.763
AEV69685.1
Retron-type reverse transcriptase; PFAM: Group II intron, maturase-specific domain; Reverse transcriptase (RNA-dependent DNA polymerase).
  
     0.763
AEV69676.1
Fe-S oxidoreductase; PFAM: Radical SAM superfamily; B12 binding domain.
       0.527
AEV66929.1
PFAM: Reverse transcriptase (RNA-dependent DNA polymerase).
  
     0.503
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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