STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69754.1Chitinase; PFAM: Glycosyl hydrolases family 18; Dockerin type I repeat; Belongs to the glycosyl hydrolase 18 family. (493 aa)    
Predicted Functional Partners:
AEV68786.1
Beta-1,4-xylanase; PFAM: Glycosyl hydrolase family 10; Domain of unknown function (DUF1083); Carbohydrate binding domain.
  
   
 0.910
AEV68465.1
Polyketide synthase family protein; PFAM: Acyl transferase domain; Phosphopantetheine attachment site; KR domain; Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain.
  
 
 0.539
AEV69231.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme.
  
  
 0.507
AEV69755.1
DNA helicase, Rad3; PFAM: DEAD_2.
       0.501
AEV69573.1
PFAM: Cellulose binding domain; Glycosyl hydrolase family 9; Glycosyl hydrolase family 48.
  
   
 0.495
AEV68753.1
glycine/D-amino acid oxidase, deaminating; PFAM: Rieske [2Fe-2S] domain; FAD dependent oxidoreductase.
   
 
 0.477
AEV69300.1
O-glycosyl hydrolase; PFAM: Dockerin type I repeat; Carbohydrate binding module (family 6); O-Glycosyl hydrolase family 30; Belongs to the glycosyl hydrolase 30 family.
  
   
0.476
AEV69216.1
Hypothetical protein; PFAM: DUF218 domain.
  
     0.473
AEV69016.1
Beta-1,4-xylanase; PFAM: Dockerin type I repeat; Glycosyl hydrolase family 10; Carbohydrate binding module (family 6); Glycosyl hydrolases family 11; Belongs to the glycosyl hydrolase 10 (cellulase F) family.
  
   
0.460
AEV69156.1
CBM6-containing protein; PFAM: Carbohydrate binding module (family 6); manually curated.
  
  
 0.453
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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