STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69756.1PFAM: Domain of Unknown Function (DUF1540). (56 aa)    
Predicted Functional Partners:
AEV69110.1
Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family.
  
     0.525
AEV70633.1
Hypothetical protein.
  
     0.493
AEV70632.1
PFAM: Cell Wall Hydrolase.
  
     0.477
AEV67075.1
PFAM: Septum formation initiator; TIGRFAM: cell division protein FtsL.
  
     0.470
AEV68357.1
LysM domain-containing protein; PFAM: LysM domain.
  
     0.467
AEV67228.1
PFAM: Protein of unknown function (DUF2935).
  
     0.466
AEV70581.1
PFAM: Putative peptidoglycan binding domain; Zinc carboxypeptidase; LysM domain.
  
     0.463
AEV66816.1
DnaD-like protein; PFAM: Replication initiation and membrane attachment protein (DnaB); TIGRFAM: DnaD and phage-associated domain.
  
     0.458
AEV69755.1
DNA helicase, Rad3; PFAM: DEAD_2.
       0.452
AEV70451.1
Hypothetical protein; Manually curated.
  
     0.449
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.