Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEV69791.1Putative integral membrane protein; PFAM: Protein of unknown function (DUF2029). (651 aa)    
Predicted Functional Partners:
AEV69793.1
PFAM: Glycosyl transferase family 2.
 
 
 
 0.787
AEV69792.1
Dolichyl-phosphate-mannose--protein O-mannosyl transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
 
    
0.770
AEV69790.1
Hypothetical protein.
 
    
0.663
AEV68749.1
Putative membrane protein; PFAM: GtrA-like protein.
 
     0.570
AEV66883.1
PFAM: Predicted membrane protein (DUF2339); manually curated.
  
     0.496
AEV68587.1
Hypothetical protein.
  
    0.451
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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