STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69885.1ABC-type bacteriocin transporter; PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family. (741 aa)    
Predicted Functional Partners:
AEV69884.1
Hypothetical protein; TIGRFAM: type I secretion membrane fusion protein, HlyD family; manually curated.
 
 
 0.984
AEV68491.1
Hypothetical protein.
    
   0.935
AEV67516.1
Hypothetical protein.
 
 
 0.898
AEV67568.1
Hypothetical protein.
 
 
 0.873
AEV69220.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
  
 
 0.687
AEV70246.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein.
  
 
 0.687
AEV70269.1
Multidrug resistance efflux pump; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit.
  
 
 0.687
AEV69822.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter; ABC transporter transmembrane region.
 
 
 
0.622
AEV67504.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
 
 
 
0.604
AEV67096.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
 
 
 
0.603
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.