STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69936.1Hypothetical protein. (499 aa)    
Predicted Functional Partners:
AEV70023.1
Protein possibly involved in post-translational modification of quorum-sensing peptides; PFAM: Accessory gene regulator B.
  
    0.653
AEV70042.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.595
AEV69237.1
PFAM: Mu transposase, C-terminal; Integrase core domain.
  
     0.549
AEV70087.1
Hypothetical protein.
  
     0.525
AEV66838.1
Putative glycosyl hydrolase; PFAM: Copper amine oxidase N-terminal domain; Glycosyl hydrolases family 18.
  
     0.469
AEV68389.1
Putative vancomycin resistance protein; PFAM: VanW like protein.
  
     0.403
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.