STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69975.1Hypothetical protein. (200 aa)    
Predicted Functional Partners:
AEV69977.1
TIGRFAM: X-X-X-Leu-X-X-Gly heptad repeats.
 
  
 0.940
AEV69976.1
Putative RND superfamily exporter; PFAM: MMPL family.
 
   
 0.912
AEV69974.1
PFAM: Bacterial regulatory proteins, tetR family.
 
     0.846
AEV66986.1
DNA primase; PFAM: CHC2 zinc finger.
  
     0.757
AEV66945.1
Hypothetical protein.
  
     0.736
AEV67007.1
Hypothetical protein.
  
     0.710
AEV68760.1
PFAM: CRISPR-associated protein (Cas_Cas02710); TIGRFAM: CRISPR-associated protein, TIGR02710 family.
  
     0.707
AEV69933.1
Putative membrane protein; PFAM: HD domain; Protein of unknown function (DUF1113).
 
    0.659
AEV66998.1
Hypothetical protein.
  
     0.646
AEV69505.1
Actin-like ATPase involved in cell division; PFAM: StbA protein.
  
     0.644
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.