STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV69981.1PFAM: Pyridoxamine 5'-phosphate oxidase. (163 aa)    
Predicted Functional Partners:
AEV69657.1
Hypothetical protein.
  
     0.659
AEV70293.1
Fucose permease; PFAM: Major Facilitator Superfamily.
  
     0.569
AEV70116.1
Putative transcriptional regulator; PFAM: Penicillinase repressor.
  
     0.526
AEV69980.1
Hypothetical protein.
       0.524
AEV69925.1
Hypothetical protein.
  
     0.484
AEV70115.1
Antirepressor regulating drug resistance protein; PFAM: BlaR1 peptidase M56.
  
     0.463
AEV67582.1
Putative transcriptional regulator; PFAM: Penicillinase repressor.
  
     0.445
AEV69085.1
ABC-type sugar transport system, periplasmic component; PFAM: Bacterial extracellular solute-binding protein.
  
     0.402
AEV69971.1
DNA-binding domain-containing protein, AraC-type; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
  
     0.401
AEV70376.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.