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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV70039.1Iron-sulfur cluster biosynthesis protein, NifU-like protein; PFAM: NifU-like N terminal domain. (125 aa)    
Predicted Functional Partners:
iscS
Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.
 
 0.976
AEV68089.1
Cysteine desulfurase family protein; PFAM: Aminotransferase class-V.
 
 0.967
AEV68211.1
PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase family protein.
  
 
 0.922
AEV70034.1
P-loop ATPase, MinD superfamily; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
     
 0.786
AEV70035.1
P-loop ATPase, MinD superfamily; PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain.
     
 0.786
AEV70033.1
Metal-dependent hydrolase, beta-lactamase superfamily II; PFAM: Metallo-beta-lactamase superfamily.
       0.780
AEV70040.1
Putative DNA-binding protein; PFAM: Protein of unknown function DUF134; Belongs to the UPF0251 family.
       0.778
AEV70036.1
Hypothetical protein; PFAM: Dinitrogenase iron-molybdenum cofactor.
       0.773
AEV70037.1
Hypothetical protein.
       0.773
AEV70038.1
PFAM: Protein of unknown function (DUF1393); manually curated.
       0.773
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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