STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV70077.1VRR-NUC domain-containing protein; PFAM: VRR-NUC domain. (95 aa)    
Predicted Functional Partners:
AEV70078.1
PFAM: Bifunctional DNA primase/polymerase, N-terminal.
 
    0.868
AEV70076.1
Hypothetical protein.
 
     0.853
AEV70191.1
PFAM: 3'-5' exonuclease; DNA polymerase family A.
 
    0.789
AEV70194.1
DNA/RNA helicase, superfamily II, SNF2 family; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; manually curated.
 
    0.788
AEV70188.1
PFAM: Bifunctional DNA primase/polymerase, N-terminal.
 
    0.787
AEV70192.1
Hypothetical protein.
 
     0.786
AEV70136.1
Putative transcriptional regulator; PFAM: HTH domain.
 
    0.783
AEV70193.1
Hypothetical protein; Manually curated.
 
     0.781
AEV70134.1
Hypothetical protein.
 
     0.717
AEV70186.1
Hypothetical protein.
 
     0.709
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.