STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV70157.1PFAM: Glycosyl hydrolases family 18. (822 aa)    
Predicted Functional Partners:
AEV70158.1
Hypothetical protein.
 
    0.957
AEV70159.1
Hypothetical protein.
 
    0.950
AEV70161.1
PFAM: Phage tail protein; TIGRFAM: putative phage tail component, N-terminal domain.
 
    0.948
AEV70160.1
PFAM: Protein of unknown function (DUF1142); TIGRFAM: phage minor structural protein, N-terminal region.
 
     0.947
AEV70162.1
Hypothetical protein.
 
    0.902
AEV70154.1
Hypothetical protein.
 
    0.880
AEV70166.1
Hypothetical protein.
 
    0.830
AEV70167.1
PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family.
 
    0.830
AEV70168.1
PFAM: Phage head-tail joining protein.
 
    0.815
AEV70124.1
Hypothetical protein.
 
    0.794
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.