STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV70169.1PFAM: Phage QLRG family, putative DNA packaging. (102 aa)    
Predicted Functional Partners:
AEV70168.1
PFAM: Phage head-tail joining protein.
 
    0.927
AEV70167.1
PFAM: Bacteriophage protein of unknown function (DUF646); TIGRFAM: phage protein, HK97 gp10 family.
 
    0.924
AEV70166.1
Hypothetical protein.
 
    0.922
AEV70165.1
TIGRFAM: phage major tail protein, phi13 family.
 
    0.909
AEV70164.1
Hypothetical protein.
 
     0.893
AEV70162.1
Hypothetical protein.
 
    0.887
AEV70163.1
Hypothetical protein.
 
     0.878
AEV70170.1
PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family.
 
    0.874
AEV70174.1
Hypothetical protein.
 
    0.808
AEV70129.1
Hypothetical protein.
 
    0.804
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.