Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEV70183.1PFAM: Phage terminase, small subunit. (183 aa)    
Predicted Functional Partners:
AEV70181.1
PFAM: ParB-like nuclease domain; DNA methylase; Belongs to the N(4)/N(6)-methyltransferase family.
 
    0.964
AEV70180.1
PFAM: DNA methylase; ParB-like nuclease domain.
 
    0.961
AEV70177.1
Hypothetical protein.
 
    0.918
AEV70179.1
Hypothetical protein.
 
     0.894
AEV70184.1
PFAM: HNH endonuclease.
 
    0.891
AEV70170.1
PFAM: Phage capsid family; TIGRFAM: phage major capsid protein, HK97 family.
 
    0.862
AEV70172.1
PFAM: Phage portal protein; TIGRFAM: phage portal protein, HK97 family.
 
    0.846
AEV70171.1
Protease subunit of ATP-dependent protease; PFAM: Clp protease; Belongs to the peptidase S14 family.
 
    0.843
AEV70173.1
Phage terminase-like protein, large subunit; PFAM: Phage Terminase.
 
     0.841
AEV70189.1
Hypothetical protein.
 
    0.813
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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