STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV70195.1Hypothetical protein. (63 aa)    
Predicted Functional Partners:
AEV70193.1
Hypothetical protein; Manually curated.
       0.793
AEV70194.1
DNA/RNA helicase, superfamily II, SNF2 family; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain; manually curated.
       0.785
AEV70196.1
PFAM: Sigma-70, region 4; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.
       0.580
AEV70192.1
Hypothetical protein.
       0.529
AEV70191.1
PFAM: 3'-5' exonuclease; DNA polymerase family A.
       0.420
AEV70190.1
Prophage antirepressor; PFAM: BRO family, N-terminal domain; Phage antirepressor protein KilAC domain.
       0.403
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.