STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV70286.1Hypothetical protein. (304 aa)    
Predicted Functional Partners:
AEV68387.1
Uncharacterized protein containing chitin-binding domain type 3; PFAM: S-layer homology domain; PKD domain; Fibronectin type III domain.
  
     0.755
AEV70360.1
Dockerin-like protein; PFAM: Dockerin type I repeat.
  
     0.753
AEV67436.1
Hypothetical protein.
 
     0.727
AEV68937.1
Rhs family protein; PFAM: Bacterial Ig-like domain (group 2); RHS Repeat; Dockerin type I repeat; Bacterial SH3 domain; TIGRFAM: YD repeat (two copies).
  
     0.726
AEV69680.1
Chromosome segregation ATPase; Manually curated.
  
    0.722
AEV69682.1
Hypothetical protein.
  
     0.708
AEV68693.1
PFAM: Protein of unknown function (DUF3237); Dockerin type I repeat.
 
     0.693
AEV69446.1
Hypothetical protein; PFAM: Acyltransferase family; manually curated.
  
     0.670
AEV69009.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; manually curated.
  
     0.668
AEV69257.1
RHS repeat-associated core domain protein; PFAM: RHS Repeat; Protein of unknown function (DUF1557); TIGRFAM: RHS repeat-associated core domain; YD repeat (two copies).
  
     0.629
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.