Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEV70520.1Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase; PFAM: Cytidylyltransferase; manually curated. (236 aa)    
Predicted Functional Partners:
AEV70516.1
N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase.
 
 
 0.974
AEV70513.1
PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG.
 
  
 0.962
AEV70519.1
TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase.
 
  
 0.938
AEV70609.1
N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family; TIGRFAM: N-acetylneuraminate synthase.
 
 
 0.882
AEV70512.1
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; TIGRFAM: UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.878
AEV70518.1
Acyl carrier protein; PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein.
       0.779
AEV70525.1
PFAM: Protein of unknown function DUF115.
 
     0.766
AEV70523.1
PFAM: Protein of unknown function DUF115.
 
     0.754
AEV70522.1
Putative nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein.
 
     0.750
AEV70515.1
methionyl-tRNA formyltransferase; PFAM: Formyl transferase.
 
     0.722
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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