STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV70521.1PFAM: Methyltransferase domain; TIGRFAM: pseudaminic acid biosynthesis-associated methylase. (214 aa)    
Predicted Functional Partners:
AEV69231.1
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; PFAM: Phosphopantetheine attachment site; AMP-binding enzyme.
  
 
 0.781
AEV70515.1
methionyl-tRNA formyltransferase; PFAM: Formyl transferase.
 
    0.742
AEV70519.1
TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase.
 
     0.735
AEV70523.1
PFAM: Protein of unknown function DUF115.
 
     0.730
AEV70524.1
Hypothetical protein.
 
     0.727
AEV70520.1
Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase; PFAM: Cytidylyltransferase; manually curated.
 
    0.720
AEV70525.1
PFAM: Protein of unknown function DUF115.
 
     0.717
AEV70522.1
Putative nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein.
 
   
 0.713
AEV70513.1
PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG.
 
     0.660
AEV67443.1
PFAM: Calcineurin-like phosphoesterase; Chromatin associated protein KTI12; TIGRFAM: polynucleotide kinase-phosphatase.
   
   0.657
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.