STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV70525.1PFAM: Protein of unknown function DUF115. (624 aa)    
Predicted Functional Partners:
AEV70524.1
Hypothetical protein.
 
    0.934
AEV70523.1
PFAM: Protein of unknown function DUF115.
 
    
0.831
AEV70520.1
Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase; PFAM: Cytidylyltransferase; manually curated.
 
     0.767
AEV70522.1
Putative nucleoside-diphosphate sugar epimerase; PFAM: Polysaccharide biosynthesis protein.
     
 0.767
AEV70519.1
TIGRFAM: pseudaminic acid biosynthesis N-acetyl transferase.
 
     0.763
AEV70516.1
N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family; TIGRFAM: pseudaminic acid synthase.
 
  
 0.759
AEV70521.1
PFAM: Methyltransferase domain; TIGRFAM: pseudaminic acid biosynthesis-associated methylase.
 
     0.717
AEV70513.1
PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: pseudaminic acid biosynthesis-associated protein PseG.
 
   
 0.714
AEV70526.1
Flagellin/flagellar hook associated protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
 
 0.657
AEV70609.1
N-acetylneuraminate synthase; PFAM: SAF domain; NeuB family; TIGRFAM: N-acetylneuraminate synthase.
 
  
 0.626
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.