Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AEV70556.1PFAM: Dockerin type I repeat; CotH protein; manually curated. (647 aa)    
Predicted Functional Partners:
AEV67086.1
Endoglucanase; PFAM: Cellulase (glycosyl hydrolase family 5); GDSL-like Lipase/Acylhydrolase; Dockerin type I repeat.
 
 
0.816
AEV69103.1
Hypothetical protein.
  
     0.663
AEV67025.1
Hypothetical protein.
  
     0.622
AEV66796.1
PFAM: ATPase family associated with various cellular activities (AAA).
  
     0.579
AEV66770.1
Hypothetical protein; PFAM: Tetratricopeptide repeat; manually curated.
  
     0.577
AEV67438.1
Hypothetical protein.
  
     0.564
AEV70638.1
Cellobiohydrolase A (1,4-beta-cellobiosidase A); PFAM: Cellulose binding domain; Cohesin domain.
  
   0.560
AEV69809.1
PFAM: Cellulose binding domain; Cohesin domain.
  
   0.559
AEV70637.1
Cellobiohydrolase A (1,4-beta-cellobiosidase A); PFAM: Cellulose binding domain; Cohesin domain; manually curated.
  
   0.543
AEV67437.1
Hypothetical protein.
  
     0.521
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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