STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEV70625.1Glycosyl transferase possibly involved in lipopolysaccharide synthesis; PFAM: Bacterial sugar transferase. (213 aa)    
Predicted Functional Partners:
AEV70624.1
PFAM: NAD dependent epimerase/dehydratase family.
  
 0.978
AEV69382.1
Capsular exopolysaccharide biosynthesis protein; PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.874
AEV67682.1
PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family.
 
  
 0.843
AEV70610.1
Hypothetical protein; TIGRFAM: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
  
 0.823
AEV70622.1
Hypothetical protein; Manually curated.
 
     0.810
AEV70623.1
PFAM: NAD dependent epimerase/dehydratase family; manually curated.
  
  
 0.791
AEV70628.1
Uncharacterized protein involved in exopolysaccharide biosynthesis; PFAM: Chain length determinant protein.
 
  
 0.760
AEV67683.1
Capsular polysaccharide biosynthesis protein; PFAM: Chain length determinant protein.
 
  
 0.753
AEV67140.1
Exopolysaccharide biosynthesis protein, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.
    
 0.700
AEV70619.1
PFAM: Glycosyl transferase family 2.
 
  
 0.690
Your Current Organism:
Hungateiclostridium clariflavum
NCBI taxonomy Id: 720554
Other names: Clostridium clariflavum DSM 19732, Clostridium clariflavum EBR45, H. clariflavum DSM 19732, Hungateiclostridium clariflavum DSM 19732
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.