STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOAG_02759ShTK domain-containing protein. (272 aa)    
Predicted Functional Partners:
LOAG_06871
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.878
A0A1I7VW80
Nsp1_C domain-containing protein.
     
 0.711
LOAG_10301
Anti-silencing protein.
    
 0.537
LOAG_04348
30S ribosomal protein S28e.
   
   0.489
LOAG_11842
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 
 0.483
LOAG_01726
30S ribosomal protein S19, variant; Belongs to the universal ribosomal protein uS19 family.
   
   0.482
A0A1I7VCM1
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.481
LOAG_03245
NEDD8 protein.
   
  0.465
LOAG_12512
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
 
 0.464
LOAG_04017
Ubiquitin.
   
  0.462
Your Current Organism:
Loa loa
NCBI taxonomy Id: 7209
Other names: L. loa, eye worm
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