STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOAG_04597ABTAP protein. (535 aa)    
Predicted Functional Partners:
LOAG_00217
RNA helicase.
   
 
 0.993
LOAG_01052
Sas10 domain-containing protein.
   
 
 0.988
LOAG_05059
Hepatocellular carcinoma-associated antigen 66.
   
 
 0.988
A0A1I7VA14
Nucleolar protein 6.
   
 
 0.982
LOAG_01324
Uncharacterized protein.
   
 
 0.982
LOAG_00945
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.975
LOAG_01569
Uncharacterized protein.
   
 
 0.970
LOAG_08140
ATP-dependent RNA helicase in chromosome III; Belongs to the DEAD box helicase family.
   
 
 0.960
LOAG_02938
Nucleolar protein 10.
   
 
 0.949
A0A1I7V6M5
MI domain-containing protein.
   
   0.942
Your Current Organism:
Loa loa
NCBI taxonomy Id: 7209
Other names: L. loa, eye worm
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