Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1I7VCV8 | A0A1I7VI29 | A0A1I7VCV8 | A0A1I7VI29 | Histone H2A; Belongs to the histone H2A family. | Histone H2B; Belongs to the histone H2B family. | 0.782 |
A0A1I7VCV8 | A0A1I7W2V9 | A0A1I7VCV8 | A0A1I7W2V9 | Histone H2A; Belongs to the histone H2A family. | Uncharacterized protein. | 0.873 |
A0A1I7VCV8 | LOAG_02724 | A0A1I7VCV8 | A0A1I7VFQ1 | Histone H2A; Belongs to the histone H2A family. | Histone H2A; Belongs to the histone H2A family. | 0.743 |
A0A1I7VCV8 | LOAG_04017 | A0A1I7VCV8 | A0A1I7VUG5 | Histone H2A; Belongs to the histone H2A family. | Ubiquitin. | 0.699 |
A0A1I7VCV8 | LOAG_10009 | A0A1I7VCV8 | A0A1I7VUF0 | Histone H2A; Belongs to the histone H2A family. | Histone H3. | 0.696 |
A0A1I7VCV8 | LOAG_10011 | A0A1I7VCV8 | A0A1I7VUI0 | Histone H2A; Belongs to the histone H2A family. | Histone H2B; Belongs to the histone H2B family. | 0.786 |
A0A1I7VCV8 | LOAG_10012 | A0A1I7VCV8 | A0A1I7VUH5 | Histone H2A; Belongs to the histone H2A family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.792 |
A0A1I7VCV8 | LOAG_10470 | A0A1I7VCV8 | A0A1I7VIJ0 | Histone H2A; Belongs to the histone H2A family. | Histone H2B; Belongs to the histone H2B family. | 0.786 |
A0A1I7VCV8 | LOAG_12973 | A0A1I7VCV8 | A0A1S0TKB0 | Histone H2A; Belongs to the histone H2A family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.792 |
A0A1I7VCV8 | LOAG_14097 | A0A1I7VCV8 | A0A1I7VCX0 | Histone H2A; Belongs to the histone H2A family. | Histone H2B; Belongs to the histone H2B family. | 0.792 |
A0A1I7VI29 | A0A1I7VCV8 | A0A1I7VI29 | A0A1I7VCV8 | Histone H2B; Belongs to the histone H2B family. | Histone H2A; Belongs to the histone H2A family. | 0.782 |
A0A1I7VI29 | A0A1I7W2V9 | A0A1I7VI29 | A0A1I7W2V9 | Histone H2B; Belongs to the histone H2B family. | Uncharacterized protein. | 0.872 |
A0A1I7VI29 | LOAG_02724 | A0A1I7VI29 | A0A1I7VFQ1 | Histone H2B; Belongs to the histone H2B family. | Histone H2A; Belongs to the histone H2A family. | 0.845 |
A0A1I7VI29 | LOAG_04017 | A0A1I7VI29 | A0A1I7VUG5 | Histone H2B; Belongs to the histone H2B family. | Ubiquitin. | 0.660 |
A0A1I7VI29 | LOAG_10009 | A0A1I7VI29 | A0A1I7VUF0 | Histone H2B; Belongs to the histone H2B family. | Histone H3. | 0.791 |
A0A1I7VI29 | LOAG_10012 | A0A1I7VI29 | A0A1I7VUH5 | Histone H2B; Belongs to the histone H2B family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.810 |
A0A1I7VI29 | LOAG_12973 | A0A1I7VI29 | A0A1S0TKB0 | Histone H2B; Belongs to the histone H2B family. | Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. | 0.810 |
A0A1I7W2V9 | A0A1I7VCV8 | A0A1I7W2V9 | A0A1I7VCV8 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.873 |
A0A1I7W2V9 | A0A1I7VI29 | A0A1I7W2V9 | A0A1I7VI29 | Uncharacterized protein. | Histone H2B; Belongs to the histone H2B family. | 0.872 |
A0A1I7W2V9 | LOAG_02724 | A0A1I7W2V9 | A0A1I7VFQ1 | Uncharacterized protein. | Histone H2A; Belongs to the histone H2A family. | 0.950 |
page 1 of 5