Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1I7VBK4 | A0A1I7VEJ4 | A0A1I7VBK4 | A0A1I7VEJ4 | RRM domain-containing protein. | Uncharacterized protein. | 0.943 |
A0A1I7VBK4 | A0A1I7VJP7 | A0A1I7VBK4 | A0A1I7VJP7 | RRM domain-containing protein. | Uncharacterized protein. | 0.822 |
A0A1I7VBK4 | A0A1I7VUJ3 | A0A1I7VBK4 | A0A1I7VUJ3 | RRM domain-containing protein. | RRM domain-containing protein. | 0.985 |
A0A1I7VBK4 | A0A1I7W4F2 | A0A1I7VBK4 | A0A1I7W4F2 | RRM domain-containing protein. | Uncharacterized protein. | 0.985 |
A0A1I7VBK4 | LOAG_03270 | A0A1I7VBK4 | A0A1I7VN94 | RRM domain-containing protein. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | 0.983 |
A0A1I7VBK4 | LOAG_05564 | A0A1I7VBK4 | A0A1I7VQD8 | RRM domain-containing protein. | Small nuclear ribonucleoprotein G. | 0.991 |
A0A1I7VBK4 | LOAG_07730 | A0A1I7VBK4 | A0A1I7V796 | RRM domain-containing protein. | Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.984 |
A0A1I7VBK4 | LOAG_08036 | A0A1I7VBK4 | A0A1I7VXF8 | RRM domain-containing protein. | U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. | 0.993 |
A0A1I7VEJ4 | A0A1I7VBK4 | A0A1I7VEJ4 | A0A1I7VBK4 | Uncharacterized protein. | RRM domain-containing protein. | 0.943 |
A0A1I7VEJ4 | A0A1I7VJP7 | A0A1I7VEJ4 | A0A1I7VJP7 | Uncharacterized protein. | Uncharacterized protein. | 0.855 |
A0A1I7VEJ4 | A0A1I7VUJ3 | A0A1I7VEJ4 | A0A1I7VUJ3 | Uncharacterized protein. | RRM domain-containing protein. | 0.943 |
A0A1I7VEJ4 | A0A1I7W4F2 | A0A1I7VEJ4 | A0A1I7W4F2 | Uncharacterized protein. | Uncharacterized protein. | 0.912 |
A0A1I7VEJ4 | LOAG_03270 | A0A1I7VEJ4 | A0A1I7VN94 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | 0.843 |
A0A1I7VEJ4 | LOAG_05564 | A0A1I7VEJ4 | A0A1I7VQD8 | Uncharacterized protein. | Small nuclear ribonucleoprotein G. | 0.605 |
A0A1I7VEJ4 | LOAG_07730 | A0A1I7VEJ4 | A0A1I7V796 | Uncharacterized protein. | Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.766 |
A0A1I7VEJ4 | LOAG_08036 | A0A1I7VEJ4 | A0A1I7VXF8 | Uncharacterized protein. | U1 small nuclear ribonucleoprotein C; Component of the U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA; Belongs to the U1 small nuclear ribonucleoprotein C family. | 0.926 |
A0A1I7VJP7 | A0A1I7VBK4 | A0A1I7VJP7 | A0A1I7VBK4 | Uncharacterized protein. | RRM domain-containing protein. | 0.822 |
A0A1I7VJP7 | A0A1I7VEJ4 | A0A1I7VJP7 | A0A1I7VEJ4 | Uncharacterized protein. | Uncharacterized protein. | 0.855 |
A0A1I7VJP7 | A0A1I7VUJ3 | A0A1I7VJP7 | A0A1I7VUJ3 | Uncharacterized protein. | RRM domain-containing protein. | 0.781 |
A0A1I7VJP7 | A0A1I7W4F2 | A0A1I7VJP7 | A0A1I7W4F2 | Uncharacterized protein. | Uncharacterized protein. | 0.771 |
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