Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1I7V5U5 | A0A1I7VK08 | A0A1I7V5U5 | A0A1I7VK08 | Nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 0.980 |
A0A1I7V5U5 | A0A1I7VLQ4 | A0A1I7V5U5 | A0A1I7VLQ4 | Nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Uncharacterized protein. | 0.992 |
A0A1I7V5U5 | A0A1I7VNN7 | A0A1I7V5U5 | A0A1I7VNN7 | Nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Uncharacterized protein. | 0.972 |
A0A1I7V5U5 | A0A1I7VXW7 | A0A1I7V5U5 | A0A1I7VXW7 | Nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.983 |
A0A1I7V5U5 | A0A1I7VZU9 | A0A1I7V5U5 | A0A1I7VZU9 | Nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.949 |
A0A1I7V5U5 | LOAG_00368 | A0A1I7V5U5 | A0A1I7VC16 | Nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.882 |
A0A1I7V5U5 | LOAG_02703 | A0A1I7V5U5 | A0A1I7VEM2 | Nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Ribosome biogenesis protein BOP1. | 0.992 |
A0A1I7V5U5 | LOAG_04753 | A0A1I7V5U5 | A0A1I7VUJ8 | Nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Uncharacterized protein. | 0.989 |
A0A1I7V5U5 | LOAG_08812 | A0A1I7V5U5 | A0A1I7VEH6 | Nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | RNA helicase. | 0.992 |
A0A1I7V5U5 | LOAG_09193 | A0A1I7V5U5 | A0A1I7W039 | Nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 30S ribosomal protein S8e. | 0.969 |
A0A1I7VK08 | A0A1I7V5U5 | A0A1I7VK08 | A0A1I7V5U5 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Nucleolar protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.980 |
A0A1I7VK08 | A0A1I7VLQ4 | A0A1I7VK08 | A0A1I7VLQ4 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.997 |
A0A1I7VK08 | A0A1I7VNN7 | A0A1I7VK08 | A0A1I7VNN7 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.991 |
A0A1I7VK08 | A0A1I7VXW7 | A0A1I7VK08 | A0A1I7VXW7 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family. | 0.999 |
A0A1I7VK08 | A0A1I7VZU9 | A0A1I7VK08 | A0A1I7VZU9 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. | 0.991 |
A0A1I7VK08 | LOAG_00368 | A0A1I7VK08 | A0A1I7VC16 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family. | 0.976 |
A0A1I7VK08 | LOAG_02703 | A0A1I7VK08 | A0A1I7VEM2 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Ribosome biogenesis protein BOP1. | 0.999 |
A0A1I7VK08 | LOAG_04753 | A0A1I7VK08 | A0A1I7VUJ8 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | Uncharacterized protein. | 0.983 |
A0A1I7VK08 | LOAG_08812 | A0A1I7VK08 | A0A1I7VEH6 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | RNA helicase. | 0.991 |
A0A1I7VK08 | LOAG_09193 | A0A1I7VK08 | A0A1I7W039 | Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. | 30S ribosomal protein S8e. | 0.993 |
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