Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1I7VP99 | A0A1I7VXW6 | A0A1I7VP99 | A0A1I7VXW6 | Uncharacterized protein. | Signal peptidase complex catalytic subunit SEC11. | 0.959 |
A0A1I7VP99 | A0A1I7VZQ7 | A0A1I7VP99 | A0A1I7VZQ7 | Uncharacterized protein. | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | 0.950 |
A0A1I7VP99 | LOAG_02427 | A0A1I7VP99 | A0A1I7VNL5 | Uncharacterized protein. | General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. | 0.950 |
A0A1I7VP99 | LOAG_06607 | A0A1I7VP99 | A0A1I7VSZ0 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.970 |
A0A1I7VP99 | LOAG_07020 | A0A1I7VP99 | A0A1I7VRY6 | Uncharacterized protein. | DNA-directed RNA polymerase II polypeptide. | 0.958 |
A0A1I7VP99 | LOAG_07303 | A0A1I7VP99 | A0A1I7W2G2 | Uncharacterized protein. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.917 |
A0A1I7VP99 | LOAG_08410 | A0A1I7VP99 | A0A1I7V657 | Uncharacterized protein. | RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein. | 0.958 |
A0A1I7VP99 | LOAG_11251 | A0A1I7VP99 | A0A1I7VPI7 | Uncharacterized protein. | DNA-directed RNA polymerase II subunit RPB11-a. | 0.958 |
A0A1I7VP99 | LOAG_17357 | A0A1I7VP99 | A0A1I7VZT3 | Uncharacterized protein. | Transcription elongation factor SPT5. | 0.961 |
A0A1I7VPC5 | A0A1I7VXW6 | A0A1I7VPC5 | A0A1I7VXW6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Signal peptidase complex catalytic subunit SEC11. | 0.959 |
A0A1I7VPC5 | A0A1I7VZQ7 | A0A1I7VPC5 | A0A1I7VZQ7 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II. | 0.950 |
A0A1I7VPC5 | LOAG_02427 | A0A1I7VPC5 | A0A1I7VNL5 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. | 0.950 |
A0A1I7VPC5 | LOAG_06607 | A0A1I7VPC5 | A0A1I7VSZ0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.970 |
A0A1I7VPC5 | LOAG_07020 | A0A1I7VPC5 | A0A1I7VRY6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase II polypeptide. | 0.958 |
A0A1I7VPC5 | LOAG_07303 | A0A1I7VPC5 | A0A1I7W2G2 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. | 0.917 |
A0A1I7VPC5 | LOAG_08410 | A0A1I7VPC5 | A0A1I7V657 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase Rpb3/Rpb11 dimerization domain-containing protein. | 0.958 |
A0A1I7VPC5 | LOAG_11251 | A0A1I7VPC5 | A0A1I7VPI7 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase II subunit RPB11-a. | 0.958 |
A0A1I7VPC5 | LOAG_17357 | A0A1I7VPC5 | A0A1I7VZT3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription elongation factor SPT5. | 0.961 |
A0A1I7VXW6 | A0A1I7VP99 | A0A1I7VXW6 | A0A1I7VP99 | Signal peptidase complex catalytic subunit SEC11. | Uncharacterized protein. | 0.959 |
A0A1I7VXW6 | A0A1I7VPC5 | A0A1I7VXW6 | A0A1I7VPC5 | Signal peptidase complex catalytic subunit SEC11. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.959 |
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