Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A1I7V7L2 | LOAG_03270 | A0A1I7V7L2 | A0A1I7VN94 | MIF4G domain-containing protein. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | 0.410 |
A0A1I7V7L2 | LOAG_06484 | A0A1I7V7L2 | A0A1I7VPM8 | MIF4G domain-containing protein. | MIF4G domain-containing protein. | 0.446 |
A0A1I7V7L2 | LOAG_10843 | A0A1I7V7L2 | A0A1I7W3C3 | MIF4G domain-containing protein. | SLBP_RNA_bind domain-containing protein. | 0.813 |
A0A1I7V7L2 | LOAG_16677 | A0A1I7V7L2 | A0A1I7VVJ8 | MIF4G domain-containing protein. | MIF4G domain-containing protein. | 0.446 |
A0A1I7VH24 | A0A1I7VW80 | A0A1I7VH24 | A0A1I7VW80 | RRM domain-containing protein. | Nsp1_C domain-containing protein. | 0.912 |
A0A1I7VH24 | LOAG_02501 | A0A1I7VH24 | A0A1I7VMQ0 | RRM domain-containing protein. | Sm protein. | 0.637 |
A0A1I7VH24 | LOAG_03270 | A0A1I7VH24 | A0A1I7VN94 | RRM domain-containing protein. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | 0.974 |
A0A1I7VH24 | LOAG_06484 | A0A1I7VH24 | A0A1I7VPM8 | RRM domain-containing protein. | MIF4G domain-containing protein. | 0.914 |
A0A1I7VH24 | LOAG_07730 | A0A1I7VH24 | A0A1I7V796 | RRM domain-containing protein. | Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.813 |
A0A1I7VH24 | LOAG_10843 | A0A1I7VH24 | A0A1I7W3C3 | RRM domain-containing protein. | SLBP_RNA_bind domain-containing protein. | 0.613 |
A0A1I7VH24 | LOAG_16677 | A0A1I7VH24 | A0A1I7VVJ8 | RRM domain-containing protein. | MIF4G domain-containing protein. | 0.914 |
A0A1I7VLS1 | LOAG_10843 | A0A1I7VLS1 | A0A1I7W3C3 | Uncharacterized protein. | SLBP_RNA_bind domain-containing protein. | 0.612 |
A0A1I7VVL3 | LOAG_02501 | A0A1I7VVL3 | A0A1I7VMQ0 | Sm protein. | Sm protein. | 0.955 |
A0A1I7VVL3 | LOAG_03270 | A0A1I7VVL3 | A0A1I7VN94 | Sm protein. | Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference and is required for primary microRNAs (miRNAs) processing. In the CBC complex, ncbp-2 recognizes and binds capped RNAs (m7GpppG-capped RNA) but requires ncbp-1 to stabilize the movement of its N-terminal loop and lock the CBC into a high affinity cap-binding state with the cap structure. | 0.594 |
A0A1I7VVL3 | LOAG_06484 | A0A1I7VVL3 | A0A1I7VPM8 | Sm protein. | MIF4G domain-containing protein. | 0.552 |
A0A1I7VVL3 | LOAG_07730 | A0A1I7VVL3 | A0A1I7V796 | Sm protein. | Small nuclear ribonucleoprotein F; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. | 0.911 |
A0A1I7VVL3 | LOAG_10843 | A0A1I7VVL3 | A0A1I7W3C3 | Sm protein. | SLBP_RNA_bind domain-containing protein. | 0.740 |
A0A1I7VVL3 | LOAG_16677 | A0A1I7VVL3 | A0A1I7VVJ8 | Sm protein. | MIF4G domain-containing protein. | 0.552 |
A0A1I7VW80 | A0A1I7VH24 | A0A1I7VW80 | A0A1I7VH24 | Nsp1_C domain-containing protein. | RRM domain-containing protein. | 0.912 |
A0A1I7VW80 | LOAG_02501 | A0A1I7VW80 | A0A1I7VMQ0 | Nsp1_C domain-containing protein. | Sm protein. | 0.710 |
page 1 of 4