STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ61879.1Peptide/nickel transport system permease protein. (297 aa)    
Predicted Functional Partners:
SFQ61890.1
Peptide ABC transporter ATPase; Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.972
SFQ61900.1
Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.967
SFQ61867.1
Peptide/nickel transport system permease protein.
 
  0.965
SFQ61856.1
Peptide/nickel transport system substrate-binding protein.
 
  0.910
SFQ61443.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.880
SFQ69793.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.880
SFQ38126.1
Oligopeptide/dipeptide ABC transporter, ATPase subunit; Peptide/nickel transport system ATP-binding protein/oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.868
SFQ25284.1
Dipeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.863
SFQ69784.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  0.861
SFQ69451.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
  0.856
Your Current Organism:
Nitratireductor indicus
NCBI taxonomy Id: 721133
Other names: CCTCC AB 209298, LMG 25540, LMG:25540, MCCC 1A01260, N. indicus, Nitratireductor indicus Lai et al. 2011, strain C115, strain RC92-7
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