Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DgriGH10686 | DgriGH10775 | B4JC76 | B4JBA9 | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.818 |
DgriGH10686 | DgriGH22147 | B4JC76 | B4J4M5 | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | GH22147. | 0.582 |
DgriGH10686 | DgriGH23002 | B4JC76 | B4JWA7 | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | GH23002. | 0.968 |
DgriGH10775 | DgriGH10686 | B4JBA9 | B4JC76 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.818 |
DgriGH10775 | DgriGH11590 | B4JBA9 | B4JBW5 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | GH11590. | 0.564 |
DgriGH10775 | DgriGH13226 | B4JBA9 | B4JQA9 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | GH13226. | 0.836 |
DgriGH10775 | DgriGH15715 | B4JBA9 | B4IZ28 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | GH15715. | 0.835 |
DgriGH10775 | DgriGH22147 | B4JBA9 | B4J4M5 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | GH22147. | 0.771 |
DgriGH10775 | DgriGH23002 | B4JBA9 | B4JWA7 | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | GH23002. | 0.681 |
DgriGH11590 | DgriGH10775 | B4JBW5 | B4JBA9 | GH11590. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.564 |
DgriGH11590 | DgriGH13226 | B4JBW5 | B4JQA9 | GH11590. | GH13226. | 0.650 |
DgriGH11590 | DgriGH15715 | B4JBW5 | B4IZ28 | GH11590. | GH15715. | 0.695 |
DgriGH11590 | DgriGH18708 | B4JBW5 | B4JGR2 | GH11590. | GH18708. | 0.562 |
DgriGH11590 | DgriGH19328 | B4JBW5 | B4JFJ0 | GH11590. | Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. | 0.626 |
DgriGH11590 | DgriGH22147 | B4JBW5 | B4J4M5 | GH11590. | GH22147. | 0.604 |
DgriGH13226 | DgriGH10775 | B4JQA9 | B4JBA9 | GH13226. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.836 |
DgriGH13226 | DgriGH11590 | B4JQA9 | B4JBW5 | GH13226. | GH11590. | 0.650 |
DgriGH13226 | DgriGH15715 | B4JQA9 | B4IZ28 | GH13226. | GH15715. | 0.997 |
DgriGH13226 | DgriGH22147 | B4JQA9 | B4J4M5 | GH13226. | GH22147. | 0.626 |
DgriGH14910 | DgriGH19328 | B4J248 | B4JFJ0 | GH14910. | Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. | 0.995 |
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