STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DgriGH21616GH21616. (810 aa)    
Predicted Functional Partners:
DgriGH14009
GH14009.
    
 
 0.608
DgriGH23223
GH23223.
    
 
 0.608
DgriGH23225
GH23225.
    
 
 0.608
DgriGH23586
GH23586.
    
 
 0.608
DgriGH10082
GH10082.
      
 0.595
DgriGH15527
GH15527.
      
 0.558
DgriGH20269
GH20269.
      
 0.557
DgriGH11301
GH11301; Belongs to the thiolase-like superfamily. Thiolase family.
      
 0.553
Cbp20
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing and RNA-mediated gene silencing (RNAi). The CBC complex is involved in miRNA-mediated RNA interference via its interaction with Ars2 and is required for primary microRNAs (miRNAs) processing. Also involved in innate immunity via the short interfering RNAs (siRNAs) processing machinery by restricting the viral RNA production. In the CBC complex, Cbp20 recognizes and binds capped RNAs [...]
      
 0.433
Your Current Organism:
Drosophila grimshawi
NCBI taxonomy Id: 7222
Other names: D. grimshawi, Idiomyia grimshawi
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