Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DgriGH10063 | DgriGH11165 | B4JD38 | B4JDD4 | GH10063. | Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded. | 0.761 |
DgriGH10063 | DgriGH13358 | B4JD38 | B4JPP9 | GH10063. | GH13358. | 0.939 |
DgriGH10063 | DgriGH13542 | B4JD38 | B4JPL3 | GH10063. | GH13542. | 0.999 |
DgriGH10063 | DgriGH13592 | B4JD38 | B4JPV4 | GH10063. | GH13592. | 0.917 |
DgriGH10063 | DgriGH13876 | B4JD38 | B4JP61 | GH10063. | GH13876. | 0.761 |
DgriGH10063 | DgriGH14771 | B4JD38 | B4J3P9 | GH10063. | GH14771. | 0.761 |
DgriGH10063 | DgriGH15714 | B4JD38 | B4IZ29 | GH10063. | GH15714. | 0.995 |
DgriGH10063 | DgriGH16528 | B4JD38 | B4J141 | GH10063. | E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily. | 0.996 |
DgriGH10063 | DgriGH18183 | B4JD38 | B4JG44 | GH10063. | Ubiquitin carboxyl-terminal hydrolase. | 0.911 |
DgriGH11165 | DgriGH10063 | B4JDD4 | B4JD38 | Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded. | GH10063. | 0.761 |
DgriGH11165 | DgriGH13542 | B4JDD4 | B4JPL3 | Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded. | GH13542. | 0.883 |
DgriGH11165 | DgriGH13592 | B4JDD4 | B4JPV4 | Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded. | GH13592. | 0.999 |
DgriGH11165 | DgriGH15714 | B4JDD4 | B4IZ29 | Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded. | GH15714. | 0.934 |
DgriGH11165 | DgriGH18183 | B4JDD4 | B4JG44 | Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded. | Ubiquitin carboxyl-terminal hydrolase. | 0.788 |
DgriGH11165 | DgriGH19872 | B4JDD4 | B4J993 | Hepatocyte growth factor-regulated tyrosine kinase substrate; Essential role in endosome membrane invagination and formation of multivesicular bodies, MVBs. Required during gastrulation and appears to regulate early embryonic signaling pathways. Inhibits tyrosine kinase receptor signaling by promoting degradation of the tyrosine-phosphorylated, active receptor, potentially by sorting activated receptors into MVBs. The MVBs are then trafficked to the lysosome where their contents are degraded. | GH19872. | 0.433 |
DgriGH13358 | DgriGH10063 | B4JPP9 | B4JD38 | GH13358. | GH10063. | 0.939 |
DgriGH13358 | DgriGH13542 | B4JPP9 | B4JPL3 | GH13358. | GH13542. | 0.902 |
DgriGH13358 | DgriGH13876 | B4JPP9 | B4JP61 | GH13358. | GH13876. | 0.428 |
DgriGH13358 | DgriGH14771 | B4JPP9 | B4J3P9 | GH13358. | GH14771. | 0.428 |
DgriGH13358 | DgriGH15714 | B4JPP9 | B4IZ29 | GH13358. | GH15714. | 0.870 |
page 1 of 4