Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DgriGH10276 | DgriGH13792 | B4JAR0 | B4JR02 | GH10276. | Endonuclease. | 0.421 |
DgriGH10936 | DgriGH13792 | B4JB10 | B4JR02 | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | Endonuclease. | 0.439 |
DgriGH10936 | DgriGH21461 | B4JB10 | B4J9S0 | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | GH21461. | 0.903 |
DgriGH10936 | DgriGH25296 | B4JB10 | B4K2N7 | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | GH25296. | 0.904 |
DgriGH13511 | DgriGH13792 | B4JPF4 | B4JR02 | GH13511. | Endonuclease. | 0.509 |
DgriGH13792 | DgriGH10276 | B4JR02 | B4JAR0 | Endonuclease. | GH10276. | 0.421 |
DgriGH13792 | DgriGH10936 | B4JR02 | B4JB10 | Endonuclease. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.439 |
DgriGH13792 | DgriGH13511 | B4JR02 | B4JPF4 | Endonuclease. | GH13511. | 0.509 |
DgriGH13792 | DgriGH20113 | B4JR02 | B4J6X1 | Endonuclease. | GH20113. | 0.678 |
DgriGH13792 | DgriGH21461 | B4JR02 | B4J9S0 | Endonuclease. | GH21461. | 0.439 |
DgriGH13792 | DgriGH25296 | B4JR02 | B4K2N7 | Endonuclease. | GH25296. | 0.439 |
DgriGH20113 | DgriGH13792 | B4J6X1 | B4JR02 | GH20113. | Endonuclease. | 0.678 |
DgriGH21461 | DgriGH10936 | B4J9S0 | B4JB10 | GH21461. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.903 |
DgriGH21461 | DgriGH13792 | B4J9S0 | B4JR02 | GH21461. | Endonuclease. | 0.439 |
DgriGH21461 | DgriGH25296 | B4J9S0 | B4K2N7 | GH21461. | GH25296. | 0.900 |
DgriGH25296 | DgriGH10936 | B4K2N7 | B4JB10 | GH25296. | NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. | 0.904 |
DgriGH25296 | DgriGH13792 | B4K2N7 | B4JR02 | GH25296. | Endonuclease. | 0.439 |
DgriGH25296 | DgriGH21461 | B4K2N7 | B4J9S0 | GH25296. | GH21461. | 0.900 |