Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DgriGH12089 | DgriGH13082 | B4JK94 | B4JR11 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.904 |
DgriGH12089 | DgriGH23289 | B4JK94 | B4K490 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | GH23289. | 0.411 |
DgriGH13082 | DgriGH12089 | B4JR11 | B4JK94 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.904 |
DgriGH13082 | DgriGH23289 | B4JR11 | B4K490 | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | GH23289. | 0.411 |
DgriGH15477 | DgriGH23289 | B4JUM1 | B4K490 | GH15477. | GH23289. | 0.411 |
DgriGH20370 | DgriGH23289 | B4J410 | B4K490 | GH20370. | GH23289. | 0.411 |
DgriGH22195 | DgriGH23289 | B4K1S2 | B4K490 | GH22195. | GH23289. | 0.411 |
DgriGH23289 | DgriGH12089 | B4K490 | B4JK94 | GH23289. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.411 |
DgriGH23289 | DgriGH13082 | B4K490 | B4JR11 | GH23289. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.411 |
DgriGH23289 | DgriGH15477 | B4K490 | B4JUM1 | GH23289. | GH15477. | 0.411 |
DgriGH23289 | DgriGH20370 | B4K490 | B4J410 | GH23289. | GH20370. | 0.411 |
DgriGH23289 | DgriGH22195 | B4K490 | B4K1S2 | GH23289. | GH22195. | 0.411 |
DgriGH23289 | DgriGH23323 | B4K490 | B4K005 | GH23289. | GH23323. | 0.411 |
DgriGH23323 | DgriGH23289 | B4K005 | B4K490 | GH23323. | GH23289. | 0.411 |