STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK85979.1Predicted oxidoreductase. (341 aa)    
Predicted Functional Partners:
dkgB
2,5-diketo-D-gluconate reductase B.
 
0.628
SHM61634.1
Aldo/keto reductase.
 
0.628
SHL92681.1
Aldo/keto reductase.
 
0.620
SHM13713.1
Aldo/keto reductase.
 
0.618
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
   
 
  0.606
SHK86011.1
3-hydroxyisobutyrate dehydrogenase.
       0.600
SHK93657.1
Aquaporin Z.
    
 
 0.551
aqpZ
Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.551
SHM57592.1
Glycerol uptake facilitator (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
 
 0.551
SHK82677.1
Serine/threonine protein phosphatase PrpC.
   
   0.545
Your Current Organism:
Bradyrhizobium lablabi
NCBI taxonomy Id: 722472
Other names: B. lablabi, Bradyrhizobium lablabi Chang et al. 2011, Bradyrhizobium sp. CCBAU 23086, Bradyrhizobium sp. CCBAU 23160, Bradyrhizobium sp. CCBAU 61434, CCBAU 23086, HAMBI 3052, LMG 25572, LMG:25572
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