STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL07860.13-phenylpropionate/trans-cinnamate dioxygenase ferredoxin subunit. (137 aa)    
Predicted Functional Partners:
SHL07889.1
Hypothetical protein.
 
  
  0.957
SHL07928.1
Hypothetical protein.
 
  
  0.954
SHL92084.1
Assimilatory nitrate reductase (NADH) beta subunit.
 
 0.888
SHL69008.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 0.870
SHL93255.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
 0.870
SHM11140.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
  
 0.868
SHL02453.1
uroporphyrinogen-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme.
  
  
 0.859
SHK89933.1
Hypothetical protein.
   
  0.842
SHL55407.1
Hypothetical protein.
 
  
  0.820
SHL55439.1
Hypothetical protein.
 
  
  0.819
Your Current Organism:
Bradyrhizobium lablabi
NCBI taxonomy Id: 722472
Other names: B. lablabi, Bradyrhizobium lablabi Chang et al. 2011, Bradyrhizobium sp. CCBAU 23086, Bradyrhizobium sp. CCBAU 23160, Bradyrhizobium sp. CCBAU 61434, CCBAU 23086, HAMBI 3052, LMG 25572, LMG:25572
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.