Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL84301.1 | SHL84356.1 | SAMN05444321_4298 | SAMN05444321_4300 | Cytochrome c. | 4Fe-4S binding domain-containing protein. | 0.718 |
SHL84301.1 | SHL84387.1 | SAMN05444321_4298 | SAMN05444321_4301 | Cytochrome c. | Biotin-(acetyl-CoA carboxylase) ligase. | 0.761 |
SHL84301.1 | SHL84420.1 | SAMN05444321_4298 | SAMN05444321_4302 | Cytochrome c. | Hypothetical protein. | 0.739 |
SHL84301.1 | SHL84479.1 | SAMN05444321_4298 | SAMN05444321_4304 | Cytochrome c. | Protein of unknown function. | 0.742 |
SHL84301.1 | SHL84511.1 | SAMN05444321_4298 | SAMN05444321_4305 | Cytochrome c. | Protein of unknown function. | 0.736 |
SHL84301.1 | SHL84539.1 | SAMN05444321_4298 | SAMN05444321_4306 | Cytochrome c. | Chaperone TorD involved in molybdoenzyme TorA maturation. | 0.680 |
SHL84301.1 | SHL84604.1 | SAMN05444321_4298 | SAMN05444321_4308 | Cytochrome c. | Formate dehydrogenase major subunit. | 0.513 |
SHL84301.1 | SHL84635.1 | SAMN05444321_4298 | SAMN05444321_4309 | Cytochrome c. | Formate dehydrogenase iron-sulfur subunit. | 0.498 |
SHL84301.1 | SHL84664.1 | SAMN05444321_4298 | SAMN05444321_4310 | Cytochrome c. | Formate dehydrogenase gamma subunit. | 0.668 |
SHL84301.1 | SHM13339.1 | SAMN05444321_4298 | SAMN05444321_5318 | Cytochrome c. | Hypothetical protein. | 0.693 |
SHL84356.1 | SHL84301.1 | SAMN05444321_4300 | SAMN05444321_4298 | 4Fe-4S binding domain-containing protein. | Cytochrome c. | 0.718 |
SHL84356.1 | SHL84387.1 | SAMN05444321_4300 | SAMN05444321_4301 | 4Fe-4S binding domain-containing protein. | Biotin-(acetyl-CoA carboxylase) ligase. | 0.897 |
SHL84356.1 | SHL84420.1 | SAMN05444321_4300 | SAMN05444321_4302 | 4Fe-4S binding domain-containing protein. | Hypothetical protein. | 0.897 |
SHL84356.1 | SHL84479.1 | SAMN05444321_4300 | SAMN05444321_4304 | 4Fe-4S binding domain-containing protein. | Protein of unknown function. | 0.911 |
SHL84356.1 | SHL84511.1 | SAMN05444321_4300 | SAMN05444321_4305 | 4Fe-4S binding domain-containing protein. | Protein of unknown function. | 0.895 |
SHL84356.1 | SHL84539.1 | SAMN05444321_4300 | SAMN05444321_4306 | 4Fe-4S binding domain-containing protein. | Chaperone TorD involved in molybdoenzyme TorA maturation. | 0.880 |
SHL84356.1 | SHL84604.1 | SAMN05444321_4300 | SAMN05444321_4308 | 4Fe-4S binding domain-containing protein. | Formate dehydrogenase major subunit. | 0.911 |
SHL84356.1 | SHL84635.1 | SAMN05444321_4300 | SAMN05444321_4309 | 4Fe-4S binding domain-containing protein. | Formate dehydrogenase iron-sulfur subunit. | 0.940 |
SHL84356.1 | SHL84664.1 | SAMN05444321_4300 | SAMN05444321_4310 | 4Fe-4S binding domain-containing protein. | Formate dehydrogenase gamma subunit. | 0.846 |
SHL84356.1 | SHM13339.1 | SAMN05444321_4300 | SAMN05444321_5318 | 4Fe-4S binding domain-containing protein. | Hypothetical protein. | 0.754 |
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