STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Brms1LD14895p; BRMS1 (Brms1) encodes a protein involved in regulation of the ecdysone signaling and the Notch signaling pathway in the wing. (259 aa)    
Predicted Functional Partners:
Sin3A
Sin3A, isoform G; Sin3A (Sin3A) encodes a chromatin regulator with roles during muscle development, cell migration and Wnt signalling regulation.
   
 0.998
CG14220
FI07430p; Histone deacetylase activity; histone deacetylase binding. It is involved in the biological process described with: histone deacetylation; negative regulation of transcription by RNA polymerase II.
  
0.990
Sap30
Histone deacetylase complex subunit SAP30 homolog; Component of the class 1 Sin3A-histone deacetylase (Rpd3) complex (HDAC). Appears to be a non-essential subunit of this complex which is not required for cell cycle regulation of progression through the G2 phase of the cell cycle; Belongs to the SAP30 family.
   
 0.990
HDAC1
Histone deacetylase HDAC1; Catalyzes the deacetylation of lysine residues on the N- terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation may constitute a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events. For instance, deacetylation of histone H3 may be a prerequisite for the subsequent recruitment of the histone methyltransferase Su(var)3-9 to histones. Involved in position-effect variegation (PEV). In the larval brain, part of a regulatory network including the transcript [...]
   
 0.987
CG7379
Inhibitor of growth protein; Methylated histone binding. It is involved in the biological process described with: positive regulation of transcription, DNA-templated.
   
 0.984
Caf1-55
Probable histone-binding protein Caf1; Core histone-binding subunit that may target chromatin assembly factors, chromatin remodeling factors and histone deacetylases to their histone substrates in a manner that is regulated by nucleosomal DNA. Component of several complexes which regulate chromatin metabolism. These include the chromatin assembly factor 1 (CAF-1) complex, which is required for chromatin assembly following DNA replication and DNA repair; the nucleosome remodeling and deacetylase complex (the NuRD complex), which promotes transcriptional repression by histone deacetylati [...]
   
 0.975
CG3815
GH06635p; Transcription coregulator activity. It is involved in the biological process described with: negative regulation of transcription by RNA polymerase II; regulation of transcription, DNA-templated.
   
 0.972
CG15356
FI15207p1; It is involved in the biological process described with: regulation of transcription, DNA-templated.
     
 0.966
Sap130
Sin3A-associated protein 130, isoform C; It is involved in the biological process described with: negative regulation of transcription by RNA polymerase II.
   
 0.961
htk
Hat-trick, isoform D; Transcription regulatory region sequence-specific DNA binding; chromatin binding; transcription cofactor binding; DNA-binding transcription factor binding. It is involved in the biological process described with: regulation of transcription by RNA polymerase II; positive regulation of transcription by RNA polymerase II; negative regulation of neuron death; positive regulation of Notch signaling pathway.
   
 0.950
Your Current Organism:
Drosophila melanogaster
NCBI taxonomy Id: 7227
Other names: D. melanogaster, Diptera sp. DNAS-2A9-224646, Sophophora melanogaster, fruit fly
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