STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qjtQuijote, isoform A; Quijote (qjt) encodes a SUMO E3 ligase and a highly conserved subunit of the Smc5/6 complex. It is enriched in heterochromatin and recruited to heterochromatic double-strand break repair sites. (233 aa)    
Predicted Functional Partners:
SMC5
Structural maintenance of chromosomes 5 (SMC5) encodes a component of the SMC5/6 protein complex that is critical to genome stability and required for homologous DNA recombination-based processes.
   
 0.995
jnj
Java no jive (jnj) encodes the Smc6 subunit of the SMC5/6 protein complex. It is involved genotoxic stress and response to caffeine.
   
 0.993
Nse1
Non-structural maintenance of chromosomes element 1 homolog; Component of the SMC5-SMC6 complex, a complex involved in repair of DNA double-strand breaks by homologous recombination. The complex may promote sister chromatid homologous recombination by recruiting the SMC1-SMC3 cohesin complex to double- strand breaks (By similarity); Belongs to the NSE1 family.
    
 0.993
Nse4
Non-SMC element 4 (Nse4) encodes a member of the EID (EP300-interacting inhibitor of differentiation) family of proteins. It is the kleisin component of the SMC5/6 protein complex. This complex is critical to genome stability, and is required for homologous DNA recombination-based processes.
    
 0.990
MAGE
RE25453p; MAGE (MAGE) encodes a component of the SMC5/6 protein complex. This complex is critical to genome stability, and is required for homologous DNA recombination-based processes.
    
 0.981
Rad60
Uncharacterized protein CG4449; It is involved in the biological process described with: double-strand break repair via homologous recombination.
   
 
 0.896
Su(var)2-10
Suppressor of variegation 2-10 (Su(var)2-10) encodes a member of the PIAS protein family that regulates chromosome structure and function. As a JAK/STAT pathway regulator, it contributes to eye formation and eye determination.
    
 
 0.844
spag4
Sperm-associated antigen 4; Protein-membrane adaptor activity. It is involved in the biological process described with: nuclear envelope organization; double-strand break repair via homologous recombination; spermatogenesis.
      
 0.837
dgrn
Degringolade, isoform A; Degringolade (dgrn) encodes a SUMO-Targeted ubiquitin ligase. During development it is required for Notch signaling and patterning. It contributes to transcriptional regulation, DNA repair, and cytoskeleton dynamics.
   
 
 0.812
smt3
Small ubiquitin-related modifier; Smt3 (smt3) encodes the only Drosophila SUMO family protein. It is required for embryonic patterning and mitosis. It may also have roles in wing patterning, Dpp signaling, and Ras/MAPK signaling. It localizes to the nucleus during interphase and to the kinetochores and midbodies during mitosis; Belongs to the ubiquitin family. SUMO subfamily.
   
 
 0.805
Your Current Organism:
Drosophila melanogaster
NCBI taxonomy Id: 7227
Other names: D. melanogaster, Diptera sp. DNAS-2A9-224646, Sophophora melanogaster, fruit fly
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