Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Archease | CG31249 | FBpp0083515 | FBpp0082916 | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB (CG9987). | RE59232p. | 0.607 |
| Archease | CG5913 | FBpp0083515 | FBpp0084312 | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB (CG9987). | Uncharacterized protein; RNA binding. | 0.543 |
| Archease | Ddx1 | FBpp0083515 | FBpp0078144 | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB (CG9987). | ATP-dependent RNA helicase Ddx1; Dead-box-1 (Ddx1) encodes a member of the DEAD box family of RNA helicases that bind and unwind double-stranded RNA. Ddx1 product depletion is associated with small size and aberrant gametogenesis, possibly through alternative splicing of Sirup RNA transcript. | 0.820 |
| Archease | RtcB | FBpp0083515 | FBpp0080746 | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB (CG9987). | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.997 |
| CG31249 | Archease | FBpp0082916 | FBpp0083515 | RE59232p. | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB (CG9987). | 0.607 |
| CG31249 | CG5913 | FBpp0082916 | FBpp0084312 | RE59232p. | Uncharacterized protein; RNA binding. | 0.966 |
| CG31249 | Ddx1 | FBpp0082916 | FBpp0078144 | RE59232p. | ATP-dependent RNA helicase Ddx1; Dead-box-1 (Ddx1) encodes a member of the DEAD box family of RNA helicases that bind and unwind double-stranded RNA. Ddx1 product depletion is associated with small size and aberrant gametogenesis, possibly through alternative splicing of Sirup RNA transcript. | 0.974 |
| CG31249 | Dhx15 | FBpp0082916 | FBpp0088040 | RE59232p. | DEAH-box helicase 15, isoform A; RNA helicase activity; RNA binding; ATP binding. It is involved in the biological process described with: positive regulation of p38MAPK cascade; mRNA splicing, via spliceosome. | 0.539 |
| CG31249 | RtcB | FBpp0082916 | FBpp0080746 | RE59232p. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.963 |
| CG5913 | Archease | FBpp0084312 | FBpp0083515 | Uncharacterized protein; RNA binding. | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB (CG9987). | 0.543 |
| CG5913 | CG31249 | FBpp0084312 | FBpp0082916 | Uncharacterized protein; RNA binding. | RE59232p. | 0.966 |
| CG5913 | Ddx1 | FBpp0084312 | FBpp0078144 | Uncharacterized protein; RNA binding. | ATP-dependent RNA helicase Ddx1; Dead-box-1 (Ddx1) encodes a member of the DEAD box family of RNA helicases that bind and unwind double-stranded RNA. Ddx1 product depletion is associated with small size and aberrant gametogenesis, possibly through alternative splicing of Sirup RNA transcript. | 0.948 |
| CG5913 | Dhx15 | FBpp0084312 | FBpp0088040 | Uncharacterized protein; RNA binding. | DEAH-box helicase 15, isoform A; RNA helicase activity; RNA binding; ATP binding. It is involved in the biological process described with: positive regulation of p38MAPK cascade; mRNA splicing, via spliceosome. | 0.430 |
| CG5913 | RtcB | FBpp0084312 | FBpp0080746 | Uncharacterized protein; RNA binding. | RNA-splicing ligase RtcB homolog; Catalytic subunit of the tRNA-splicing ligase complex that acts by directly joining spliced tRNA halves to mature-sized tRNAs by incorporating the precursor-derived splice junction phosphate into the mature tRNA as a canonical 3',5'-phosphodiester. May act as an RNA ligase with broad substrate specificity, and may function toward other RNAs; Belongs to the RtcB family. | 0.742 |
| CG7504 | Ddx1 | FBpp0271875 | FBpp0078144 | Uncharacterized protein, isoform B; Transcription termination site sequence-specific DNA binding; RNA binding. It is involved in the biological process described with: termination of RNA polymerase II transcription. | ATP-dependent RNA helicase Ddx1; Dead-box-1 (Ddx1) encodes a member of the DEAD box family of RNA helicases that bind and unwind double-stranded RNA. Ddx1 product depletion is associated with small size and aberrant gametogenesis, possibly through alternative splicing of Sirup RNA transcript. | 0.687 |
| CSN3 | Ddx1 | FBpp0077927 | FBpp0078144 | COP9 signalosome complex subunit 3; Component of the COP9 signalosome complex (CSN), a complex involved in various cellular and developmental processes. The CSN complex is an essential regulator of the ubiquitin (Ubl) conjugation pathway by mediating the deneddylation of the cullin subunits of the SCF-type E3 ligase complexes, leading to decrease the Ubl ligase activity of SCF. The CSN complex plays an essential role in oogenesis and embryogenesis and is required for proper photoreceptor R cell differentiation and promote lamina glial cell migration or axon targeting. It also promotes [...] | ATP-dependent RNA helicase Ddx1; Dead-box-1 (Ddx1) encodes a member of the DEAD box family of RNA helicases that bind and unwind double-stranded RNA. Ddx1 product depletion is associated with small size and aberrant gametogenesis, possibly through alternative splicing of Sirup RNA transcript. | 0.736 |
| Ddx1 | Archease | FBpp0078144 | FBpp0083515 | ATP-dependent RNA helicase Ddx1; Dead-box-1 (Ddx1) encodes a member of the DEAD box family of RNA helicases that bind and unwind double-stranded RNA. Ddx1 product depletion is associated with small size and aberrant gametogenesis, possibly through alternative splicing of Sirup RNA transcript. | Protein archease-like; Component of the tRNA-splicing ligase complex required to facilitate the enzymatic turnover of catalytic subunit RtcB (CG9987). | 0.820 |
| Ddx1 | CG31249 | FBpp0078144 | FBpp0082916 | ATP-dependent RNA helicase Ddx1; Dead-box-1 (Ddx1) encodes a member of the DEAD box family of RNA helicases that bind and unwind double-stranded RNA. Ddx1 product depletion is associated with small size and aberrant gametogenesis, possibly through alternative splicing of Sirup RNA transcript. | RE59232p. | 0.974 |
| Ddx1 | CG5913 | FBpp0078144 | FBpp0084312 | ATP-dependent RNA helicase Ddx1; Dead-box-1 (Ddx1) encodes a member of the DEAD box family of RNA helicases that bind and unwind double-stranded RNA. Ddx1 product depletion is associated with small size and aberrant gametogenesis, possibly through alternative splicing of Sirup RNA transcript. | Uncharacterized protein; RNA binding. | 0.948 |
| Ddx1 | CG7504 | FBpp0078144 | FBpp0271875 | ATP-dependent RNA helicase Ddx1; Dead-box-1 (Ddx1) encodes a member of the DEAD box family of RNA helicases that bind and unwind double-stranded RNA. Ddx1 product depletion is associated with small size and aberrant gametogenesis, possibly through alternative splicing of Sirup RNA transcript. | Uncharacterized protein, isoform B; Transcription termination site sequence-specific DNA binding; RNA binding. It is involved in the biological process described with: termination of RNA polymerase II transcription. | 0.687 |
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