STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CG31898Uncharacterized protein. (333 aa)    
Predicted Functional Partners:
CG31517
GEO09362p1.
   
  
 0.913
CG42307
GH15104p1.
      
 0.654
CG13631
GEO09349p1.
      
 0.606
CG31759
Uncharacterized protein, isoform C; 3'-5'-exoribonuclease activity. It is involved in the biological process described with: nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay.
   
  
 0.605
Mat89Ba
Nucleolar protein 6; RNA binding. It is involved in the biological process described with: tRNA export from nucleus; rRNA processing; Belongs to the NRAP family.
   
  
 0.507
RNaseZ
Ribonuclease Z, mitochondrial; Ribonuclease Z (RNaseZ) is a highly conserved gene that encodes the endoribonuclease RNase Z, which cleaves pre-tRNA molecules directly 3' to the discriminator. It has at least two biological roles - nuclear pre-tRNA processing and mitochondrial primary transcript processing.
   
  
 0.506
CG15098
LP21121p.
      
 0.493
Rpp25
FI09323p; RNA binding; ribonuclease P activity. It is involved in the biological process described with: tRNA 5'-leader removal.
   
  
 0.473
rdgBbeta
Cytoplasmic phosphatidylinositol transfer protein 1; Phosphatidylinositol transfer proteins mediate the monomeric transport of lipids by shielding a lipid from the aqueous environment and binding the lipid in a hydrophobic cavity.
   
  
 0.448
CG11275
FI01029p; Ubiquitin protein ligase binding. It is involved in the biological process described with: ubiquitin-dependent protein catabolic process; proteasome-mediated ubiquitin-dependent protein catabolic process; regulation of proteolysis.
      
 0.426
Your Current Organism:
Drosophila melanogaster
NCBI taxonomy Id: 7227
Other names: D. melanogaster, Diptera sp. DNAS-2A9-224646, Sophophora melanogaster, fruit fly
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.