STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prodNon-histone chromosomal protein Prod; It is involved in the biological process described with: mitotic chromosome condensation; regulation of circadian rhythm; lymph gland development. (346 aa)    
Predicted Functional Partners:
CG14074
IP10578p.
   
   0.994
lwr
Lesswright (lwr) encodes Ubc9, a SUMO conjugating enzyme that accepts SUMO from the SUMO activating enzyme and hands it off to the SUMO conjugation target. It has documented biological functions in innate immunity, meiosis, and anterior patterning of the embryo.
   
   0.994
CG11123
RH42110p; RNA binding.
   
  
 0.681
bocks
LEM domain-containing protein Bocksbeutel; Inner nuclear membrane protein. May have a role in maintaining the structural integrity of the nuclear lamina. During pupal development, plays essential and redundant functions with the other LEM domain proteins; MAN1 and Ote. Also has a redundant but important role with Ote in larval development.
   
 
 0.622
CG7839
IP14658p; It is involved in the biological process described with: ribosome biogenesis.
   
  
 0.611
HIPP1
HP1 and insulator partner protein 1 (HIPP1) encodes a chromatin-associated protein, displaying strong protein-protein interaction with the product of Su(var)205. It is localized to pericentric heterochromatin, and potentially has a separate role bound to insulators along with the products of su(Hw), mod(mdg4) and Cp190.
   
  
 0.511
CG3847
LD24968p; RNA polymerase II regulatory region sequence-specific DNA binding; sequence-specific DNA binding; DNA-binding transcription factor activity, RNA polymerase II-specific. It is involved in the biological process described with: regulation of transcription by RNA polymerase II.
   
    0.493
CG3548
SD02086p.
   
   0.481
CG15107
Uncharacterized protein, isoform B.
   
  
0.454
YL-1
Vacuolar protein sorting-associated protein 72 homolog; Part of the Tip60 chromatin-remodeling complex which is involved in DNA repair. Upon induction of DNA double-strand breaks, this complex acetylates phosphorylated H2AV in nucleosomes and exchanges it with unmodified H2AV.
   
  
 0.450
Your Current Organism:
Drosophila melanogaster
NCBI taxonomy Id: 7227
Other names: D. melanogaster, Diptera sp. DNAS-2A9-224646, Sophophora melanogaster, fruit fly
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