CG5770 protein (Drosophila melanogaster) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CG5770

LP06072p. (213 aa)

Predicted Functional Partners:

CG18787

0.672

CG6834

0.668

CG14191

0.652

CG4563

0.640

CG4250

0.637

CG6908

0.627

CG6277

0.587

CG4927

0.527

CG7542

0.504

Mal-B1

0.491

Your Current Organism:

Drosophila melanogaster

NCBI taxonomy Id: 7227
Other names: D. melanogaster, Diptera sp. DNAS-2A9-224646, Sophophora melanogaster, fruit fly

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CG14191	CG18787	FBpp0074436	FBpp0302819	Uncharacterized protein.	C3H1-type domain-containing protein; Nuclear localization sequence binding; RNA binding; metal ion binding; structural constituent of nuclear pore. It is involved in the biological process described with: protein import into nucleus; RNA export from nucleus; telomere tethering at nuclear periphery; posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery.	0.680
CG14191	CG4250	FBpp0074436	FBpp0301555	Uncharacterized protein.	Uncharacterized protein, isoform B.	0.616
CG14191	CG4563	FBpp0074436	FBpp0072262	Uncharacterized protein.	RE01528p; Fatty acid ligase activity; CoA-ligase activity. It is involved in the biological process described with: fatty acid biosynthetic process.	0.616
CG14191	CG4927	FBpp0074436	FBpp0099998	Uncharacterized protein.	IP10038p; Serine-type endopeptidase activity. It is involved in the biological process described with: proteolysis; Belongs to the peptidase S1 family.	0.522
CG14191	CG5770	FBpp0074436	FBpp0085991	Uncharacterized protein.	LP06072p.	0.652
CG14191	CG6277	FBpp0074436	FBpp0084520	Uncharacterized protein.	FI01825p; Lipase activity; phospholipase A1 activity. It is involved in the biological process described with: lipid catabolic process.	0.533
CG14191	CG6834	FBpp0074436	FBpp0081914	Uncharacterized protein.	FI23918p1; Myosin binding.	0.629
CG14191	CG6908	FBpp0074436	FBpp0081913	Uncharacterized protein.	Uncharacterized protein, isoform A; It is involved in the biological process described with: copper ion homeostasis.	0.608
CG14191	CG7542	FBpp0074436	FBpp0311536	Uncharacterized protein.	AT07769p; Serine-type endopeptidase activity. It is involved in the biological process described with: proteolysis; Belongs to the peptidase S1 family.	0.482
CG14191	Mal-B1	FBpp0074436	FBpp0079859	Uncharacterized protein.	Maltase B1; Maltose alpha-glucosidase activity. It is involved in the biological process described with: carbohydrate metabolic process.	0.667
CG18787	CG14191	FBpp0302819	FBpp0074436	C3H1-type domain-containing protein; Nuclear localization sequence binding; RNA binding; metal ion binding; structural constituent of nuclear pore. It is involved in the biological process described with: protein import into nucleus; RNA export from nucleus; telomere tethering at nuclear periphery; posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery.	Uncharacterized protein.	0.680
CG18787	CG4250	FBpp0302819	FBpp0301555	C3H1-type domain-containing protein; Nuclear localization sequence binding; RNA binding; metal ion binding; structural constituent of nuclear pore. It is involved in the biological process described with: protein import into nucleus; RNA export from nucleus; telomere tethering at nuclear periphery; posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery.	Uncharacterized protein, isoform B.	0.661
CG18787	CG4563	FBpp0302819	FBpp0072262	C3H1-type domain-containing protein; Nuclear localization sequence binding; RNA binding; metal ion binding; structural constituent of nuclear pore. It is involved in the biological process described with: protein import into nucleus; RNA export from nucleus; telomere tethering at nuclear periphery; posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery.	RE01528p; Fatty acid ligase activity; CoA-ligase activity. It is involved in the biological process described with: fatty acid biosynthetic process.	0.662
CG18787	CG4927	FBpp0302819	FBpp0099998	C3H1-type domain-containing protein; Nuclear localization sequence binding; RNA binding; metal ion binding; structural constituent of nuclear pore. It is involved in the biological process described with: protein import into nucleus; RNA export from nucleus; telomere tethering at nuclear periphery; posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery.	IP10038p; Serine-type endopeptidase activity. It is involved in the biological process described with: proteolysis; Belongs to the peptidase S1 family.	0.524
CG18787	CG5770	FBpp0302819	FBpp0085991	C3H1-type domain-containing protein; Nuclear localization sequence binding; RNA binding; metal ion binding; structural constituent of nuclear pore. It is involved in the biological process described with: protein import into nucleus; RNA export from nucleus; telomere tethering at nuclear periphery; posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery.	LP06072p.	0.672
CG18787	CG6277	FBpp0302819	FBpp0084520	C3H1-type domain-containing protein; Nuclear localization sequence binding; RNA binding; metal ion binding; structural constituent of nuclear pore. It is involved in the biological process described with: protein import into nucleus; RNA export from nucleus; telomere tethering at nuclear periphery; posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery.	FI01825p; Lipase activity; phospholipase A1 activity. It is involved in the biological process described with: lipid catabolic process.	0.602
CG18787	CG6834	FBpp0302819	FBpp0081914	C3H1-type domain-containing protein; Nuclear localization sequence binding; RNA binding; metal ion binding; structural constituent of nuclear pore. It is involved in the biological process described with: protein import into nucleus; RNA export from nucleus; telomere tethering at nuclear periphery; posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery.	FI23918p1; Myosin binding.	0.668
CG18787	CG6908	FBpp0302819	FBpp0081913	C3H1-type domain-containing protein; Nuclear localization sequence binding; RNA binding; metal ion binding; structural constituent of nuclear pore. It is involved in the biological process described with: protein import into nucleus; RNA export from nucleus; telomere tethering at nuclear periphery; posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery.	Uncharacterized protein, isoform A; It is involved in the biological process described with: copper ion homeostasis.	0.661
CG18787	CG7542	FBpp0302819	FBpp0311536	C3H1-type domain-containing protein; Nuclear localization sequence binding; RNA binding; metal ion binding; structural constituent of nuclear pore. It is involved in the biological process described with: protein import into nucleus; RNA export from nucleus; telomere tethering at nuclear periphery; posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery.	AT07769p; Serine-type endopeptidase activity. It is involved in the biological process described with: proteolysis; Belongs to the peptidase S1 family.	0.492
CG18787	Mal-B1	FBpp0302819	FBpp0079859	C3H1-type domain-containing protein; Nuclear localization sequence binding; RNA binding; metal ion binding; structural constituent of nuclear pore. It is involved in the biological process described with: protein import into nucleus; RNA export from nucleus; telomere tethering at nuclear periphery; posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery.	Maltase B1; Maltose alpha-glucosidase activity. It is involved in the biological process described with: carbohydrate metabolic process.	0.496