STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rdgBbetaCytoplasmic phosphatidylinositol transfer protein 1; Phosphatidylinositol transfer proteins mediate the monomeric transport of lipids by shielding a lipid from the aqueous environment and binding the lipid in a hydrophobic cavity. (273 aa)    
Predicted Functional Partners:
CG13631
GEO09349p1.
      
 0.670
Mat89Ba
Nucleolar protein 6; RNA binding. It is involved in the biological process described with: tRNA export from nucleus; rRNA processing; Belongs to the NRAP family.
   
  
 0.609
CG15098
LP21121p.
      
 0.606
Vap33
VAMP-associated protein 33kDa, isoform B; VAMP-associated protein 33kDa (Vap33) encodes a protein that plays a conserved role in synaptic homeostasis. It controls a number of processes which depend on phosphoinositide levels, such as synaptic growth and axonal transport. It binds to the product of Sac1 to maintain normal levels of phosphoinositides and to the product of Dscam1 to affect its localization within axonal projections.
   
 
 0.596
Rpp25
FI09323p; RNA binding; ribonuclease P activity. It is involved in the biological process described with: tRNA 5'-leader removal.
   
  
 0.545
Helz
Uncharacterized protein, isoform B; RNA binding; metal ion binding. It is involved in the biological process described with: posttranscriptional gene silencing by RNA.
      
 0.538
CG15916
RH08992p; It is involved in the biological process described with: rRNA processing.
   
    0.506
CG11275
FI01029p; Ubiquitin protein ligase binding. It is involved in the biological process described with: ubiquitin-dependent protein catabolic process; proteasome-mediated ubiquitin-dependent protein catabolic process; regulation of proteolysis.
      
 0.493
mrt
Martik, isoform A; Transcription regulatory region sequence-specific DNA binding. It is involved in the biological process described with: gene silencing; regulation of chromatin organization.
   
  
 0.491
CG5149
LD15196p.
   
    0.461
Your Current Organism:
Drosophila melanogaster
NCBI taxonomy Id: 7227
Other names: D. melanogaster, Diptera sp. DNAS-2A9-224646, Sophophora melanogaster, fruit fly
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