Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Amt | cuff | FBpp0112150 | FBpp0087141 | Ammonium transporter (Amt) encodes a protein required for ammonia detection. | Cutoff (cuff) encodes a protein that interacts with the products of rhi and del in a germline complex that allows noncanonical transcription of dual-strand piRNA clusters. The product of cuff is therefore an integral part of the piRNA response to transposon activity in the germline. In its absence, a DNA damage checkpoint is activated leading to ventralization of the egg and embryo. | 0.491 |
| CG13251 | Rat1 | FBpp0077901 | FBpp0078973 | CCDC66 domain-containing protein; Microtubule binding. It is involved in the biological process described with: retinal rod cell development. | Rat1 5'-3' exoribonuclease (Rat1) encodes a member of the 5'-3' exonuclease family. It is required for mRNA processing and mutations cause phenotypes in various cell types, including the nervous system. | 0.809 |
| CG13251 | cuff | FBpp0077901 | FBpp0087141 | CCDC66 domain-containing protein; Microtubule binding. It is involved in the biological process described with: retinal rod cell development. | Cutoff (cuff) encodes a protein that interacts with the products of rhi and del in a germline complex that allows noncanonical transcription of dual-strand piRNA clusters. The product of cuff is therefore an integral part of the piRNA response to transposon activity in the germline. In its absence, a DNA damage checkpoint is activated leading to ventralization of the egg and embryo. | 0.587 |
| CG15160 | CG9018 | FBpp0310376 | FBpp0072788 | Uncharacterized protein, isoform C; RNA polymerase II complex binding. It is involved in the biological process described with: mRNA 3'-end processing. | Uncharacterized protein, isoform A; RNA polymerase II complex binding. It is involved in the biological process described with: mRNA 3'-end processing. | 0.887 |
| CG15160 | Rat1 | FBpp0310376 | FBpp0078973 | Uncharacterized protein, isoform C; RNA polymerase II complex binding. It is involved in the biological process described with: mRNA 3'-end processing. | Rat1 5'-3' exoribonuclease (Rat1) encodes a member of the 5'-3' exonuclease family. It is required for mRNA processing and mutations cause phenotypes in various cell types, including the nervous system. | 0.833 |
| CG15160 | cuff | FBpp0310376 | FBpp0087141 | Uncharacterized protein, isoform C; RNA polymerase II complex binding. It is involved in the biological process described with: mRNA 3'-end processing. | Cutoff (cuff) encodes a protein that interacts with the products of rhi and del in a germline complex that allows noncanonical transcription of dual-strand piRNA clusters. The product of cuff is therefore an integral part of the piRNA response to transposon activity in the germline. In its absence, a DNA damage checkpoint is activated leading to ventralization of the egg and embryo. | 0.587 |
| CG5964 | Rat1 | FBpp0075816 | FBpp0078973 | Uncharacterized protein; It is involved in the biological process described with: cilium assembly; establishment of epithelial cell polarity. | Rat1 5'-3' exoribonuclease (Rat1) encodes a member of the 5'-3' exonuclease family. It is required for mRNA processing and mutations cause phenotypes in various cell types, including the nervous system. | 0.929 |
| CG5964 | cuff | FBpp0075816 | FBpp0087141 | Uncharacterized protein; It is involved in the biological process described with: cilium assembly; establishment of epithelial cell polarity. | Cutoff (cuff) encodes a protein that interacts with the products of rhi and del in a germline complex that allows noncanonical transcription of dual-strand piRNA clusters. The product of cuff is therefore an integral part of the piRNA response to transposon activity in the germline. In its absence, a DNA damage checkpoint is activated leading to ventralization of the egg and embryo. | 0.811 |
| CG8414 | Rat1 | FBpp0086393 | FBpp0078973 | Polynucleotide 5'-hydroxyl-kinase NOL9; Polynucleotide 5'-kinase involved in rRNA processing. Belongs to the Clp1 family. NOL9/GRC3 subfamily. | Rat1 5'-3' exoribonuclease (Rat1) encodes a member of the 5'-3' exonuclease family. It is required for mRNA processing and mutations cause phenotypes in various cell types, including the nervous system. | 0.721 |
| CG8414 | cuff | FBpp0086393 | FBpp0087141 | Polynucleotide 5'-hydroxyl-kinase NOL9; Polynucleotide 5'-kinase involved in rRNA processing. Belongs to the Clp1 family. NOL9/GRC3 subfamily. | Cutoff (cuff) encodes a protein that interacts with the products of rhi and del in a germline complex that allows noncanonical transcription of dual-strand piRNA clusters. The product of cuff is therefore an integral part of the piRNA response to transposon activity in the germline. In its absence, a DNA damage checkpoint is activated leading to ventralization of the egg and embryo. | 0.479 |
| CG9018 | CG15160 | FBpp0072788 | FBpp0310376 | Uncharacterized protein, isoform A; RNA polymerase II complex binding. It is involved in the biological process described with: mRNA 3'-end processing. | Uncharacterized protein, isoform C; RNA polymerase II complex binding. It is involved in the biological process described with: mRNA 3'-end processing. | 0.887 |
| CG9018 | Rat1 | FBpp0072788 | FBpp0078973 | Uncharacterized protein, isoform A; RNA polymerase II complex binding. It is involved in the biological process described with: mRNA 3'-end processing. | Rat1 5'-3' exoribonuclease (Rat1) encodes a member of the 5'-3' exonuclease family. It is required for mRNA processing and mutations cause phenotypes in various cell types, including the nervous system. | 0.930 |
| CG9018 | cuff | FBpp0072788 | FBpp0087141 | Uncharacterized protein, isoform A; RNA polymerase II complex binding. It is involved in the biological process described with: mRNA 3'-end processing. | Cutoff (cuff) encodes a protein that interacts with the products of rhi and del in a germline complex that allows noncanonical transcription of dual-strand piRNA clusters. The product of cuff is therefore an integral part of the piRNA response to transposon activity in the germline. In its absence, a DNA damage checkpoint is activated leading to ventralization of the egg and embryo. | 0.810 |
| Rat1 | CG13251 | FBpp0078973 | FBpp0077901 | Rat1 5'-3' exoribonuclease (Rat1) encodes a member of the 5'-3' exonuclease family. It is required for mRNA processing and mutations cause phenotypes in various cell types, including the nervous system. | CCDC66 domain-containing protein; Microtubule binding. It is involved in the biological process described with: retinal rod cell development. | 0.809 |
| Rat1 | CG15160 | FBpp0078973 | FBpp0310376 | Rat1 5'-3' exoribonuclease (Rat1) encodes a member of the 5'-3' exonuclease family. It is required for mRNA processing and mutations cause phenotypes in various cell types, including the nervous system. | Uncharacterized protein, isoform C; RNA polymerase II complex binding. It is involved in the biological process described with: mRNA 3'-end processing. | 0.833 |
| Rat1 | CG5964 | FBpp0078973 | FBpp0075816 | Rat1 5'-3' exoribonuclease (Rat1) encodes a member of the 5'-3' exonuclease family. It is required for mRNA processing and mutations cause phenotypes in various cell types, including the nervous system. | Uncharacterized protein; It is involved in the biological process described with: cilium assembly; establishment of epithelial cell polarity. | 0.929 |
| Rat1 | CG8414 | FBpp0078973 | FBpp0086393 | Rat1 5'-3' exoribonuclease (Rat1) encodes a member of the 5'-3' exonuclease family. It is required for mRNA processing and mutations cause phenotypes in various cell types, including the nervous system. | Polynucleotide 5'-hydroxyl-kinase NOL9; Polynucleotide 5'-kinase involved in rRNA processing. Belongs to the Clp1 family. NOL9/GRC3 subfamily. | 0.721 |
| Rat1 | CG9018 | FBpp0078973 | FBpp0072788 | Rat1 5'-3' exoribonuclease (Rat1) encodes a member of the 5'-3' exonuclease family. It is required for mRNA processing and mutations cause phenotypes in various cell types, including the nervous system. | Uncharacterized protein, isoform A; RNA polymerase II complex binding. It is involved in the biological process described with: mRNA 3'-end processing. | 0.930 |
| Rat1 | cuff | FBpp0078973 | FBpp0087141 | Rat1 5'-3' exoribonuclease (Rat1) encodes a member of the 5'-3' exonuclease family. It is required for mRNA processing and mutations cause phenotypes in various cell types, including the nervous system. | Cutoff (cuff) encodes a protein that interacts with the products of rhi and del in a germline complex that allows noncanonical transcription of dual-strand piRNA clusters. The product of cuff is therefore an integral part of the piRNA response to transposon activity in the germline. In its absence, a DNA damage checkpoint is activated leading to ventralization of the egg and embryo. | 0.951 |
| Rat1 | rhi | FBpp0078973 | FBpp0086056 | Rat1 5'-3' exoribonuclease (Rat1) encodes a member of the 5'-3' exonuclease family. It is required for mRNA processing and mutations cause phenotypes in various cell types, including the nervous system. | RE36324p; Rhino (rhi) encodes an ovary-restricted heterochromatin protein 1 gene required for female fertility. It silences germline transposable elements by promoting transcription of the small RNAs encoded in Piwi-RNAclusters. | 0.522 |
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