Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE17309.1 | SFE20518.1 | SAMN02910278_00123 | SAMN02910278_00238 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.487 |
SFE17309.1 | SFE20655.1 | SAMN02910278_00123 | SAMN02910278_00244 | Hypothetical protein. | Protein of unknown function. | 0.414 |
SFE17309.1 | SFE67991.1 | SAMN02910278_00123 | SAMN02910278_01439 | Hypothetical protein. | Hypothetical protein. | 0.534 |
SFE20518.1 | SFE17309.1 | SAMN02910278_00238 | SAMN02910278_00123 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.487 |
SFE20518.1 | SFE20655.1 | SAMN02910278_00238 | SAMN02910278_00244 | Transcriptional regulator, TetR family. | Protein of unknown function. | 0.448 |
SFE20518.1 | SFE24368.1 | SAMN02910278_00238 | SAMN02910278_00400 | Transcriptional regulator, TetR family. | 2,4-dienoyl-CoA reductase. | 0.457 |
SFE20518.1 | SFE67991.1 | SAMN02910278_00238 | SAMN02910278_01439 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.665 |
SFE20518.1 | pth | SAMN02910278_00238 | SAMN02910278_01060 | Transcriptional regulator, TetR family. | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.441 |
SFE20655.1 | SFE17309.1 | SAMN02910278_00244 | SAMN02910278_00123 | Protein of unknown function. | Hypothetical protein. | 0.414 |
SFE20655.1 | SFE20518.1 | SAMN02910278_00244 | SAMN02910278_00238 | Protein of unknown function. | Transcriptional regulator, TetR family. | 0.448 |
SFE20655.1 | SFE67991.1 | SAMN02910278_00244 | SAMN02910278_01439 | Protein of unknown function. | Hypothetical protein. | 0.530 |
SFE24368.1 | SFE20518.1 | SAMN02910278_00400 | SAMN02910278_00238 | 2,4-dienoyl-CoA reductase. | Transcriptional regulator, TetR family. | 0.457 |
SFE67991.1 | SFE17309.1 | SAMN02910278_01439 | SAMN02910278_00123 | Hypothetical protein. | Hypothetical protein. | 0.534 |
SFE67991.1 | SFE20518.1 | SAMN02910278_01439 | SAMN02910278_00238 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.665 |
SFE67991.1 | SFE20655.1 | SAMN02910278_01439 | SAMN02910278_00244 | Hypothetical protein. | Protein of unknown function. | 0.530 |
pth | SFE20518.1 | SAMN02910278_01060 | SAMN02910278_00238 | peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | Transcriptional regulator, TetR family. | 0.441 |