STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE34629.1Hypothetical protein. (218 aa)    
Predicted Functional Partners:
SFE34600.1
Hypothetical protein.
 
     0.937
SFE34697.1
DNA modification methylase.
 
    0.898
SFE34557.1
Protein of unknown function.
 
     0.897
SFE34761.1
Hypothetical protein.
 
     0.897
SFE34861.1
5-methylcytosine-specific restriction enzyme A.
 
    0.848
SFE34345.1
Phage portal protein.
 
    0.840
SFE34459.1
Hypothetical protein.
 
    0.825
SFE34433.1
Phage terminase-like protein, large subunit, contains N-terminal HTH domain.
 
    0.824
SFE34664.1
DNA (cytosine-5)-methyltransferase 1.
 
    0.817
SFE35032.1
Hypothetical protein.
 
    0.798
Your Current Organism:
Peptostreptococcus sp. D1
NCBI taxonomy Id: 72304
Other names: P. sp. D1
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