Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFE36707.1 | SFE36732.1 | SAMN02910278_00677 | SAMN02910278_00678 | Thiazolinyl imide reductase. | Hypothetical protein. | 0.938 |
SFE36707.1 | SFE36762.1 | SAMN02910278_00677 | SAMN02910278_00679 | Thiazolinyl imide reductase. | Pyochelin synthetase. | 0.989 |
SFE36707.1 | SFE36844.1 | SAMN02910278_00677 | SAMN02910278_00682 | Thiazolinyl imide reductase. | Condensation domain-containing protein. | 0.940 |
SFE36707.1 | SFE36866.1 | SAMN02910278_00677 | SAMN02910278_00683 | Thiazolinyl imide reductase. | Yersiniabactin nonribosomal peptide synthetase. | 0.992 |
SFE36707.1 | SFE36901.1 | SAMN02910278_00677 | SAMN02910278_00684 | Thiazolinyl imide reductase. | Yersiniabactin salicyl-AMP ligase. | 0.851 |
SFE36707.1 | SFE36928.1 | SAMN02910278_00677 | SAMN02910278_00685 | Thiazolinyl imide reductase. | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.802 |
SFE36707.1 | SFE36950.1 | SAMN02910278_00677 | SAMN02910278_00686 | Thiazolinyl imide reductase. | Surfactin synthase thioesterase subunit. | 0.934 |
SFE36732.1 | SFE36707.1 | SAMN02910278_00678 | SAMN02910278_00677 | Hypothetical protein. | Thiazolinyl imide reductase. | 0.938 |
SFE36732.1 | SFE36762.1 | SAMN02910278_00678 | SAMN02910278_00679 | Hypothetical protein. | Pyochelin synthetase. | 0.985 |
SFE36732.1 | SFE36844.1 | SAMN02910278_00678 | SAMN02910278_00682 | Hypothetical protein. | Condensation domain-containing protein. | 0.955 |
SFE36732.1 | SFE36866.1 | SAMN02910278_00678 | SAMN02910278_00683 | Hypothetical protein. | Yersiniabactin nonribosomal peptide synthetase. | 0.975 |
SFE36732.1 | SFE36901.1 | SAMN02910278_00678 | SAMN02910278_00684 | Hypothetical protein. | Yersiniabactin salicyl-AMP ligase. | 0.887 |
SFE36732.1 | SFE36928.1 | SAMN02910278_00678 | SAMN02910278_00685 | Hypothetical protein. | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.866 |
SFE36732.1 | SFE36950.1 | SAMN02910278_00678 | SAMN02910278_00686 | Hypothetical protein. | Surfactin synthase thioesterase subunit. | 0.907 |
SFE36762.1 | SFE36707.1 | SAMN02910278_00679 | SAMN02910278_00677 | Pyochelin synthetase. | Thiazolinyl imide reductase. | 0.989 |
SFE36762.1 | SFE36732.1 | SAMN02910278_00679 | SAMN02910278_00678 | Pyochelin synthetase. | Hypothetical protein. | 0.985 |
SFE36762.1 | SFE36844.1 | SAMN02910278_00679 | SAMN02910278_00682 | Pyochelin synthetase. | Condensation domain-containing protein. | 0.969 |
SFE36762.1 | SFE36866.1 | SAMN02910278_00679 | SAMN02910278_00683 | Pyochelin synthetase. | Yersiniabactin nonribosomal peptide synthetase. | 0.999 |
SFE36762.1 | SFE36901.1 | SAMN02910278_00679 | SAMN02910278_00684 | Pyochelin synthetase. | Yersiniabactin salicyl-AMP ligase. | 0.997 |
SFE36762.1 | SFE36928.1 | SAMN02910278_00679 | SAMN02910278_00685 | Pyochelin synthetase. | 4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. | 0.997 |
page 1 of 5