STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE42249.1HlyD family secretion protein. (375 aa)    
Predicted Functional Partners:
SFE42182.1
Putative ABC transport system permease protein.
 
 0.995
SFE42217.1
Putative ABC transport system ATP-binding protein.
  
 0.960
SFE43267.1
Putative ABC transport system permease protein.
  
 0.929
SFE67293.1
FtsX-like permease family protein.
  
 0.910
SFE91232.1
ABC-type transport system, involved in lipoprotein release, permease component.
 
 0.874
SFE17334.1
Putative ABC transport system ATP-binding protein.
  
 0.852
SFE67241.1
Putative ABC transport system ATP-binding protein.
  
 0.852
SFE74783.1
Putative ABC transport system ATP-binding protein.
  
 0.852
SFE55160.1
Putative ABC transport system ATP-binding protein.
  
 0.813
SFE66443.1
Putative ABC transport system ATP-binding protein.
  
 0.812
Your Current Organism:
Peptostreptococcus sp. D1
NCBI taxonomy Id: 72304
Other names: P. sp. D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.