SFE48485.1 protein (Peptostreptococcus sp. D1)

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Predicted Interactions

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Score

SFE48485.1

Uncharacterized protein. (172 aa)

Predicted Functional Partners:

rpmF

0.979

rpsC

0.924

rplK

0.877

rplA

0.864

rplM

0.850

rpsB

0.849

rpsF

0.849

rplU

0.848

rpsP

0.847

infC

0.844

Your Current Organism:

Peptostreptococcus sp. D1

NCBI taxonomy Id: 72304
Other names: P. sp. D1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFE48485.1	infC	SAMN02910278_00942	SAMN02910278_00241	Uncharacterized protein.	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.844
SFE48485.1	rplA	SAMN02910278_00942	SAMN02910278_01556	Uncharacterized protein.	Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.864
SFE48485.1	rplK	SAMN02910278_00942	SAMN02910278_01557	Uncharacterized protein.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.877
SFE48485.1	rplM	SAMN02910278_00942	SAMN02910278_01194	Uncharacterized protein.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.850
SFE48485.1	rplU	SAMN02910278_00942	SAMN02910278_01000	Uncharacterized protein.	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.848
SFE48485.1	rpmF	SAMN02910278_00942	SAMN02910278_00941	Uncharacterized protein.	Large subunit ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.979
SFE48485.1	rpsB	SAMN02910278_00942	SAMN02910278_00077	Uncharacterized protein.	Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.849
SFE48485.1	rpsC	SAMN02910278_00942	SAMN02910278_01241	Uncharacterized protein.	Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.924
SFE48485.1	rpsF	SAMN02910278_00942	SAMN02910278_01462	Uncharacterized protein.	Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.849
SFE48485.1	rpsP	SAMN02910278_00942	SAMN02910278_01358	Uncharacterized protein.	Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.847
infC	SFE48485.1	SAMN02910278_00241	SAMN02910278_00942	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Uncharacterized protein.	0.844
infC	rplA	SAMN02910278_00241	SAMN02910278_01556	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.	0.942
infC	rplK	SAMN02910278_00241	SAMN02910278_01557	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.924
infC	rplM	SAMN02910278_00241	SAMN02910278_01194	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.954
infC	rplU	SAMN02910278_00241	SAMN02910278_01000	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.899
infC	rpmF	SAMN02910278_00241	SAMN02910278_00941	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Large subunit ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.876
infC	rpsB	SAMN02910278_00241	SAMN02910278_00077	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.978
infC	rpsC	SAMN02910278_00241	SAMN02910278_01241	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.	0.979
infC	rpsF	SAMN02910278_00241	SAMN02910278_01462	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Small subunit ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.971
infC	rpsP	SAMN02910278_00241	SAMN02910278_01358	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.950